RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
TRAIP-210ENST00000489948 SATB2Q9UPW6 733 aa12.62□□□□□ -0.39
TRAIP-210ENST00000489948 ATG4BQ9Y4P1 393 aa12.62□□□□□ -0.39
TRAIP-210ENST00000489948 TMEM184BQ9Y519 407 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-210ENST00000489948 PCDHA9Q9Y5H5 950 aa12.62□□□□□ -0.39
TRAIP-210ENST00000489948 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
TRAIP-210ENST00000489948 A0A1W2PR48 441 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 BBIP1A8MTZ0 92 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 C9orf172C9J069 976 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 CYR61O00622 381 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 IL6P05231 212 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 CYC1P08574 325 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 IL12AP29459 219 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 TLX1P31314 330 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SRSF11Q05519 484 aaKnown RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 ABHD18Q0P651 414 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 C3orf38Q5JPI3 329 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 ARHGAP40Q5TG30 622 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SLC48A1Q6P1K1 146 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 TREML1Q86YW5 311 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 DTWD1Q8N5C7 304 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 KRTCAP2Q8N6L1 136 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 OR5T3Q8NGG3 340 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 COQ8BQ96D53 544 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 CLIP3Q96DZ5 547 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 CSF3RQ99062 836 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 PRPF18Q99633 342 aaKnown RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 ULBP3Q9BZM4 244 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 BHLHE41Q9C0J9 482 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 TGIF2Q9GZN2 237 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SLC26A1Q9H2B4 701 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 POLR1BQ9H9Y6 1135 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 WDR41Q9HAD4 459 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 ZNF304Q9HCX3 659 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 MKKSQ9NPJ1 570 aaPredicted RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 MIEF1Q9NQG6 463 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 ATAD3AQ9NVI7 634 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 NDOR1Q9UHB4 597 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 MRPS33Q9Y291 106 aaKnown RBP12.61□□□□□ -0.39
TRAIP-210ENST00000489948 PCDHGA7Q9Y5G6 932 aa12.61□□□□□ -0.39
TRAIP-210ENST00000489948 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SPTBN4Q9H254 2564 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 PMS2P1A4D2B8 440 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SYNDIG1LA6NDD5 238 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 MEN1O00255 615 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 NVLO15381 856 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CHST10O43529 356 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 DXOO77932 396 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 KIAA0754O94854 1291 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 ALBP02768 609 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 COX7A2P14406 83 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 ZNF28P17035 718 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 ALAS2P22557 587 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CPN2P22792 545 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CD82P27701 267 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 PPP2R1BP30154 601 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 FRKP42685 505 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 KIR3DL1P43629 444 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 POLR2JP52435 117 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 MAPK10P53779 464 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 KCNK10P57789 538 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 OLR1P78380 273 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 DCDP81605 110 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SHC2P98077 582 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 C2orf80Q0P641 193 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 LRRC74AQ0VAA2 488 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CEBPEQ15744 281 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 AGKQ53H12 422 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 ZNF595Q8IYB9 648 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SAMD14Q8IZD0 417 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 OR51Q1Q8NH59 317 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CDC26Q8NHZ8 85 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 RP9Q8TA86 221 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 DNAJB14Q8TBM8 379 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 TANKQ92844 425 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 TBC1D20Q96BZ9 403 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CMTM5Q96DZ9 223 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 SLC52A3Q9NQ40 469 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 C14orf105Q9NVL8 296 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 FAM120CQ9NX05 1096 aaKnown RBP12.6□□□□□ -0.39
TRAIP-210ENST00000489948 HCN3Q9P1Z3 774 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 FBXW2Q9UKT8 454 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 ACSL6Q9UKU0 697 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CES1P1Q9UKY3 287 aa12.6□□□□□ -0.39
TRAIP-210ENST00000489948 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 GABRR3A8MPY1 467 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 CDRT15L2A8MXV6 281 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 CFLARO15519 480 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 DNAJB6O75190 326 aa12.59□□□□□ -0.39
TRAIP-210ENST00000489948 STK17BO94768 372 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms