RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 NOL11Q9H8H0 719 aaKnown RBP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 PSMC3IPQ9P2W1 217 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-230ENST00000489430 PHF11Q9UIL8 331 aa17.76■□□□□ 0.43
MRPL55-230ENST00000489430 COL12A1Q99715 3063 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 LRRC14BA6NHZ5 514 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 GABRR3A8MPY1 467 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 FCHO1O14526 889 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 OR7A17O14581 309 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 SEMA3DO95025 777 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 RPS17P08708 135 aaKnown RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 FAM153BP0C7A2 387 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 CD46P15529 392 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 TNFRSF8P28908 595 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 PPP2R1BP30154 601 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 TLX1P31314 330 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 CD96P40200 585 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 GPR143P51810 404 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 HNRNPFP52597 415 aaKnown RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 STX4Q12846 297 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 DDX39BQ13838 428 aaKnown RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 OR1C1Q15619 314 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 FAM153CQ494X1 144 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 ZNF766Q5HY98 468 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 AMER2Q8N7J2 671 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 TMEM178AQ8NBL3 297 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 MYRIPQ8NFW9 859 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 PRR7Q8TB68 274 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 PSMG3-AS1Q96PY0 264 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 TAAR6Q96RI8 345 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 MAPKAP1Q9BPZ7 522 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 CDCP1Q9H5V8 836 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 DDX31Q9H8H2 851 aaKnown RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 RNF11Q9Y3C5 154 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 CLCA3PQ9Y6N3 262 aa17.75■□□□□ 0.43
MRPL55-230ENST00000489430 USP9XQ93008 2570 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-230ENST00000489430 TGFBR3LH3BV60 316 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 RTCAO00442 366 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 PLPP1O14494 284 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 OTCP00480 354 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 F10P00742 488 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 GSTA1P08263 222 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 TAC1P20366 129 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 RPS13P62277 151 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 SLAMF1Q13291 335 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 ZRSR2Q15696 482 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 FRG2Q64ET8 278 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 GPR180Q86V85 440 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 KIF2BQ8N4N8 673 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 MORN4Q8NDC4 146 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 OR52B6Q8NGF0 335 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 OR14A16Q8NHC5 309 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 SSC4DQ8WTU2 575 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 TANKQ92844 425 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 SCMH1Q96GD3 660 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 C5orf34Q96MH7 638 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 FRG2BQ96QU4 278 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 SERPINI1Q99574 410 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 ALOXE3Q9BYJ1 711 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 EPB41L4BQ9H329 900 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 ZBTB26Q9HCK0 441 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 PNO1Q9NRX1 252 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 RYDENQ9NUL5 291 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 LYARQ9NX58 379 aaKnown RBP17.74■□□□□ 0.43
MRPL55-230ENST00000489430 HECTD1Q9ULT8 2610 aa17.74■□□□□ 0.43
MRPL55-230ENST00000489430 PTPN13Q12923 2485 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 SCN2AQ99250 2005 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 A8MUA0 341 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 NEURL1O76050 574 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 ZFAND5O76080 213 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 SBK3P0C264 359 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 CPN2P22792 545 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 CYB561P49447 251 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 HERVK_113P63132 956 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 IGLV3-21P80748 117 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-230ENST00000489430 OC90Q02509 493 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-230ENST00000489430 RASA2Q15283 850 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 OR8K3Q8NH51 312 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 ZNF483Q8TF39 744 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-230ENST00000489430 ERVK-6Q9BXR3 956 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 ZNF717Q9BY31 904 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-230ENST00000489430 RPF2Q9H7B2 306 aaKnown RBP17.73■□□□□ 0.43
MRPL55-230ENST00000489430 LRFN1Q9P244 771 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 SLC5A6Q9Y289 635 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 CPAMD8Q8IZJ3 1885 aa17.73■□□□□ 0.43
MRPL55-230ENST00000489430 ESPL1Q14674 2120 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 POLEQ07864 2286 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 A0A0A6YYD5 115 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 TRBV11-1A0A0K0K1C0 115 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 ASPDHA6ND91 283 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 WIPF3A6NGB9 483 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 A8MT66 165 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 SAP18O00422 153 aaKnown RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 MAN1A2O60476 641 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 SEMA7AO75326 666 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 MLYCDO95822 493 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 IFNA16P05015 189 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 TPP2P29144 1249 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 BSGP35613 385 aa17.72■□□□□ 0.43
MRPL55-230ENST00000489430 ARL1P40616 181 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-230ENST00000489430 BUD31P41223 144 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms