RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 MED12LQ86YW9 2145 aa8.41□□□□□ -1.06
SSBP1-212ENST00000489378 TENM1Q9UKZ4 2725 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CD8B2A6NJW9 211 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 NDUFS4O43181 175 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PSTPIP1O43586 416 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CEP104O60308 925 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CATP04040 527 aaKnown RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 TMIGD3P0DMS9 266 aaPredicted RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 RPS3P23396 243 aaKnown RBP eCLIP8.4□□□□□ -1.064e-7■■□□□ 12.1
SSBP1-212ENST00000489378 HRH2P25021 359 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 LOXP28300 417 aaPredicted RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 IMPA1P29218 277 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ATP5DP30049 168 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 GATA4P43694 442 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PRAMEP78395 509 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ZBED6P86452 979 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 SLC18A3Q16572 532 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 AARS2Q5JTZ9 985 aaKnown RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CCDC181Q5TID7 509 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PRAMEF20Q5VT98 475 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 RBM43Q6ZSC3 357 aaKnown RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PLEKHM3Q6ZWE6 761 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 KATNAL2Q8IYT4 538 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 RCOR2Q8IZ40 523 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 RASGEF1CQ8N431 466 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ZNF321PQ8N8H1 164 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 MFSD9Q8NBP5 474 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ROBO4Q8WZ75 1007 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ZBED6CLQ96FA7 236 aaPredicted RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 MARK4Q96L34 752 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 BIRC8Q96P09 236 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PRDM14Q9GZV8 571 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 ZFP64Q9NPA5 681 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CAMK2AQ9UQM7 478 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 CLDN16Q9Y5I7 305 aa8.4□□□□□ -1.06
SSBP1-212ENST00000489378 GPC6Q9Y625 555 aaPredicted RBP8.4□□□□□ -1.06
SSBP1-212ENST00000489378 PSMD12O00232 456 aaPredicted RBP8.39□□□□□ -1.07
SSBP1-212ENST00000489378 CD3EAPO15446 510 aaKnown RBP8.39□□□□□ -1.07
SSBP1-212ENST00000489378 NDUFS3O75489 264 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 RNH1P13489 461 aaKnown RBP8.39□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
SSBP1-212ENST00000489378 CRYGSP22914 178 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 FMO4P31512 558 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 MC3RP41968 323 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 SLCO1A2P46721 670 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 TTPAP49638 278 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 TBPL1P62380 186 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 KCNJ2P63252 427 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 NR1I3Q14994 352 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 RPS6KA1Q15418 735 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 STX1AQ16623 288 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 DCST1Q5T197 706 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 PLXDC2Q6UX71 529 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 LRRC6Q86X45 466 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 SCUBE1Q8IWY4 988 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 REXO1L1PQ8IX06 675 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 DEPDC4Q8N2C3 294 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF441Q8N8Z8 693 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 TMEM171Q8WVE6 324 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 PANX2Q96RD6 677 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 FAM129AQ9BZQ8 928 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 LRTM1Q9HBL6 345 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 PROK2Q9HC23 129 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 SH2D2AQ9NP31 389 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 ANAPC5Q9UJX4 755 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 CDC42EP3Q9UKI2 254 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 RIMKLBQ9ULI2 386 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 BOKQ9UMX3 212 aaPredicted RBP8.39□□□□□ -1.07
SSBP1-212ENST00000489378 DYSFO75923 2080 aa8.39□□□□□ -1.07
SSBP1-212ENST00000489378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CTAGE15A4D2H0 777 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 AVILO75366 819 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 LRATO95237 230 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 SERPIND1P05546 499 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CDH1P12830 882 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 ADRA1DP25100 572 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 SOX18P35713 384 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CPOXP36551 454 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 HNF4AP41235 474 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 GRIA1P42261 906 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 RAB8AP61006 207 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 FAM27E3Q08E93 113 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 BMPR2Q13873 1038 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 ASTE1Q2TB18 679 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 NKAPLQ5M9Q1 402 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 OPN5Q6U736 354 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 SASS6Q6UVJ0 657 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 SYDE1Q6ZW31 735 aaPredicted RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CTAGE6Q86UF2 777 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 RHOT2Q8IXI1 618 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 CA13Q8N1Q1 262 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 FAM71DQ8N9W8 422 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
SSBP1-212ENST00000489378 KRT35Q92764 455 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 NTNG2Q96CW9 530 aa8.38□□□□□ -1.07
SSBP1-212ENST00000489378 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms