RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ITGA1P56199 1179 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 OLR1P78380 273 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 LIPEQ05469 1076 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 BNIP2Q12982 314 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SLC14A1Q13336 389 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SPIDRQ14159 915 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 GPR19Q15760 415 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SPDYE7PQ495Y7 208 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 GTDC1Q4AE62 458 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 OR52E8Q6IFG1 317 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SLC48A1Q6P1K1 146 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 PRSS41Q7RTY9 318 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 MSRB3Q8IXL7 192 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SAMD14Q8IZD0 417 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 OR9A4Q8NGU2 314 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 ADAMTS18Q8TE60 1221 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 KLHL6Q8WZ60 621 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 OR5P2Q8WZ92 322 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 JADE3Q92613 823 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 AURKBQ96GD4 344 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 SMIM10Q96HG1 83 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 CCDC74BQ96LY2 380 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 C10orf90Q96M02 699 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 CPPED1Q9BRF8 314 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 NPLQ9BXD5 320 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 TRIM8Q9BZR9 551 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 ALG2Q9H553 416 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 NEUROD4Q9HD90 331 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 TMEM9BQ9NQ34 198 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SLC35C2Q9NQQ7 365 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 TAS2R7Q9NYW3 318 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SLC25A37Q9NYZ2 338 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 VAPAQ9P0L0 249 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 SEMA5BQ9P283 1151 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 C5AR2Q9P296 337 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 ZNF282Q9UDV7 671 aaPredicted RBP9.48□□□□□ -0.89
USP11-211ENST00000489111 CORO2BQ9UQ03 480 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 POMPQ9Y244 141 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 PCDHB14Q9Y5E9 798 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 ZNF780BQ9Y6R6 833 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 GON4LQ3T8J9 2241 aa9.48□□□□□ -0.89
USP11-211ENST00000489111 TRBV5-3A0A0A0MS03 114 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 A0A0A6YYC8 382 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 IGHV5-10-1A0A0J9YXX1 117 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 A0A1W2PQM1 296 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FITM1A5D6W6 292 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 D6RAR5 112 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 I3L1I5 382 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 SGK494L7N484 410 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SCN2BO60939 215 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 GMNNO75496 209 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 PRKRAO75569 313 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 ERAL1O75616 437 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 SORBS2O94875 1100 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 GP1BAP07359 652 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CTSBP07858 339 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 MSL3P1P0C860 447 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ZCCHC18P0CG32 403 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 RNH1P13489 461 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 PTPN6P29350 595 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 GPC1P35052 558 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CHI3L1P36222 383 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 GSK3BP49841 420 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 NCBP2P52298 156 aaKnown RBP eCLIP9.47□□□□□ -0.89
USP11-211ENST00000489111 EMP3P54852 163 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 LIM2P55344 173 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 RAB38P57729 211 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ACTR3P61158 418 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SHC2P98077 582 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ACY1Q03154 408 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 HSPB3Q12988 150 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 RUNX2Q13950 521 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FAM53BQ14153 422 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SELPLGQ14242 412 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 MAP7Q14244 749 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 CYP51A1Q16850 503 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 MPEG1Q2M385 716 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FAM214AQ32MH5 1076 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 AASDHQ4L235 1098 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 RUNDC3AQ59EK9 446 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 PHF19Q5T6S3 580 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 C18orf63Q68DL7 685 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ANGPTL8Q6UXH0 198 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 IFNEQ86WN2 208 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 PDSS2Q86YH6 399 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 NAXDQ8IW45 347 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 C10orf67Q8IYJ2 551 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FAM156AQ8NDB6 213 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 TNIP2Q8NFZ5 429 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 WDR60Q8WVS4 1066 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 ATOH1Q92858 354 aaPredicted RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 ASB9Q96DX5 294 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 FAM120BQ96EK7 910 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
USP11-211ENST00000489111 LRGUKQ96M69 825 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SLC35A5Q9BS91 424 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 NDC1Q9BTX1 674 aa9.47□□□□□ -0.89
USP11-211ENST00000489111 SPRTNQ9H040 489 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms