RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 OR51B5Q9H339 312 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ADAP2Q9NPF8 381 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 NINJ2Q9NZG7 142 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 TINAGQ9UJW2 476 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 ANGPTL3Q9Y5C1 460 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CLCA3PQ9Y6N3 262 aa11.12□□□□□ -0.63
CCHCR1-215ENST00000488920 CROCCQ5TZA2 2017 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 CRYBG3Q68DQ2 2970 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ARHGAP10A1A4S6 786 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 TMEM200CA6NKL6 621 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 PEX1O43933 1283 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 OR2J2O76002 312 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 GFAPP14136 432 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 HIST1H1TP22492 207 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 TYK2P29597 1187 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 PHBP35232 272 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 RFC3P40938 356 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 SSR2P43308 183 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 HSF1Q00613 529 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 PCDH1Q08174 1060 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 SLAMF1Q13291 335 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 SETDB1Q15047 1291 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ACAP2Q15057 778 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ELAVL1Q15717 326 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 WHAMMP3Q1A5X7 153 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 DEPDC1Q5TB30 811 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 KHDRBS2Q5VWX1 349 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 MDGA2Q7Z553 956 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 MRGPRGQ86SM5 289 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 SULF2Q8IWU5 870 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 HUS1BQ8NHY5 278 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 RHEBL1Q8TAI7 183 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 IFT81Q8WYA0 676 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 CMTM7Q96FZ5 175 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 GPR78Q96P69 363 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 MTERF1Q99551 399 aaKnown RBP11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 OR8D2Q9GZM6 311 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 VPS11Q9H270 941 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 VTI1BQ9UEU0 232 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF835Q9Y2P0 537 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 KLF13Q9Y2Y9 288 aaPredicted RBP11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 CENPEQ02224 2701 aa11.11□□□□□ -0.63
CCHCR1-215ENST00000488920 C17orf105B2RV13 164 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 KLRC4-KLRK1H3BQV0 150 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 WWP2O00308 870 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 KLHL2O95198 593 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ACSL3O95573 720 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ALDOAP04075 364 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ESRRAP11474 423 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ZNF24P17028 368 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 CPN2P22792 545 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 GRNP28799 593 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 SERPINB1P30740 379 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 PTGER1P34995 402 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 MEOX1P50221 254 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 SERPINB8P50452 374 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 SSR4P51571 173 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ALDH18A1P54886 795 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 GPR85P60893 370 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ART3Q13508 389 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 OR4C11Q6IEV9 310 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 MTFR2Q6P444 385 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 KLC3Q6P597 504 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 OR4N5Q8IXE1 308 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 CYP4Z2PQ8N1L4 340 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 NOA1Q8NC60 698 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 MORN4Q8NDC4 146 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 RGMAQ96B86 450 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ANKRD9Q96BM1 317 aaPredicted RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ACTR8Q9H981 624 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 CPSF2Q9P2I0 782 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 MYOTQ9UBF9 498 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 MTRF1LQ9UGC7 380 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ADGRE2Q9UHX3 823 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 ERVK-11Q9UQG0 969 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 YARS2Q9Y2Z4 477 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 SPACA6W5XKT8 324 aa11.1□□□□□ -0.63
CCHCR1-215ENST00000488920 DIDO1Q9BTC0 2240 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 KLK8O60259 260 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 OR6B1O95007 311 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 SCELO95171 688 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 SIX3O95343 332 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ETHE1O95571 254 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ABOP16442 354 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 PIK3CBP42338 1070 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 NEK2P51955 445 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 RAP1GDS1P52306 607 aa11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 RPS13P62277 151 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-215ENST00000488920 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms