RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 NECTIN3Q9NQS3 549 aa14.14□□□□□ -0.15
CXCL12-207ENST00000488591 LYARQ9NX58 379 aaKnown RBP14.14□□□□□ -0.15
CXCL12-207ENST00000488591 KCMF1Q9P0J7 381 aa14.14□□□□□ -0.15
CXCL12-207ENST00000488591 ZNF225Q9UK10 706 aa14.14□□□□□ -0.15
CXCL12-207ENST00000488591 SLC12A4Q9UP95 1085 aa14.14□□□□□ -0.15
CXCL12-207ENST00000488591 KALRNO60229 2985 aa14.14□□□□□ -0.15
CXCL12-207ENST00000488591 TLN1Q9Y490 2541 aaKnown RBP14.13□□□□□ -0.15
CXCL12-207ENST00000488591 IGKV3D-11A0A0A0MRZ8 115 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 TCRBV16S1A1N1A0A5B0 115 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 ARHGAP10A1A4S6 786 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 ETHE1O95571 254 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 BSGP35613 385 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 ZNF33BQ06732 778 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 STX4Q12846 297 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 CSTF3Q12996 717 aaKnown RBP14.13□□□□□ -0.15
CXCL12-207ENST00000488591 CRB2Q5IJ48 1285 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 ISLR2Q6UXK2 745 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 FRMD7Q6ZUT3 714 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 SCUBE1Q8IWY4 988 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 M1APQ8TC57 530 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 AGAP11Q8TF27 550 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 LMF1Q96S06 567 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 CSF3RQ99062 836 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 STMN4Q9H169 189 aaPredicted RBP14.13□□□□□ -0.15
CXCL12-207ENST00000488591 EPS8L2Q9H6S3 715 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 WDR41Q9HAD4 459 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 FARSBQ9NSD9 589 aaKnown RBP14.13□□□□□ -0.15
CXCL12-207ENST00000488591 TEKT2Q9UIF3 430 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 ADAM29Q9UKF5 820 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 COL6A6A6NMZ7 2263 aa14.13□□□□□ -0.15
CXCL12-207ENST00000488591 TNRC6AQ8NDV7 1962 aaKnown RBP14.13□□□□□ -0.15
CXCL12-207ENST00000488591 CTIFO43310 598 aaKnown RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 SUV39H1O43463 412 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 EEDO75530 441 aaKnown RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 FAM58BPP0C7Q3 252 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PPP2R1BP30154 601 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 BUD31P41223 144 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 SERTAD2Q14140 314 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PCLAFQ15004 111 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 BEND6Q5SZJ8 279 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 IGFL3Q6UXB1 125 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 ATG14Q6ZNE5 492 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PRICKLE2Q7Z3G6 844 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 CLNKQ7Z7G1 428 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 GBP7Q8N8V2 638 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 BRIX1Q8TDN6 353 aaKnown RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 TANKQ92844 425 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PGM2Q96G03 612 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 CNDP1Q96KN2 507 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 WDR77Q9BQA1 342 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 TRMOQ9BU70 441 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PNO1Q9NRX1 252 aaKnown RBP14.12□□□□□ -0.15
CXCL12-207ENST00000488591 PTGFRNQ9P2B2 879 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 SLC17A7Q9P2U7 560 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
CXCL12-207ENST00000488591 A0A0A6YYD5 115 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 GOLGA6L10A6NI86 522 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 A8MUA0 341 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 PROM1O43490 865 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 SLC28A2O43868 658 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 TYROBPO43914 113 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 GUCY1B2O75343 617 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 IFNA16P05015 189 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 KLK1P06870 262 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 CELA2AP08217 269 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ITGAMP11215 1152 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ALDH3A1P30838 453 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 HNRNPFP52597 415 aaKnown RBP14.11□□□□□ -0.15
CXCL12-207ENST00000488591 TAS2R50P59544 299 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 BIKQ13323 160 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 MFAP5Q13361 173 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 CCNYL2Q5T2Q4 361 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 EXOC3L1Q86VI1 746 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 METTL4Q8N3J2 472 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 SIRT6Q8N6T7 355 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 TMEM52Q8NDY8 209 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ZNF717Q9BY31 904 aaPredicted RBP14.11□□□□□ -0.15
CXCL12-207ENST00000488591 MRPL1Q9BYD6 325 aaKnown RBP14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ALOXE3Q9BYJ1 711 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 RPF2Q9H7B2 306 aaKnown RBP14.11□□□□□ -0.15
CXCL12-207ENST00000488591 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 SSU72Q9NP77 194 aaKnown RBP14.11□□□□□ -0.15
CXCL12-207ENST00000488591 MMP25Q9NPA2 562 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ASB4Q9Y574 426 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 TIMM22Q9Y584 194 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 ACTL7BQ9Y614 415 aa14.11□□□□□ -0.15
CXCL12-207ENST00000488591 DOCK10Q96BY6 2186 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 SPTA1P02549 2419 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 SAGE2PA6NJ88 616 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 A8MUI8 341 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 UBFD1O14562 309 aaKnown RBP14.1□□□□□ -0.15
CXCL12-207ENST00000488591 UROSP10746 265 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 CREB1P16220 341 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 TNNI3P19429 210 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 CASRP41180 1078 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 HNRNPH2P55795 449 aaKnown RBP14.1□□□□□ -0.15
CXCL12-207ENST00000488591 SLC26A5P58743 744 aa14.1□□□□□ -0.15
CXCL12-207ENST00000488591 TNFRSF17Q02223 184 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms