RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ACOT4Q8N9L9 421 aa19.2■□□□□ 0.66
NECAB3-213ENST00000488489 ANKRD60Q9BZ19 345 aa19.2■□□□□ 0.66
NECAB3-213ENST00000488489 DDX18Q9NVP1 670 aaKnown RBP19.2■□□□□ 0.66
NECAB3-213ENST00000488489 ZNF282Q9UDV7 671 aaPredicted RBP19.2■□□□□ 0.66
NECAB3-213ENST00000488489 GMEB1Q9Y692 573 aa19.2■□□□□ 0.66
NECAB3-213ENST00000488489 CABIN1Q9Y6J0 2220 aa19.2■□□□□ 0.66
NECAB3-213ENST00000488489 THADAQ6YHU6 1953 aa19.2■□□□□ 0.66
NECAB3-213ENST00000488489 FAM149AA5PLN7 773 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 H3BSA7 217 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 HNRNPRO43390 633 aaKnown RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 CREG1O75629 220 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 MT-ND1P03886 318 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 NUDT7P0C024 238 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ATP5A1P25705 553 aaKnown RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 PCSK6P29122 969 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 MVDP53602 400 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 KRT80Q6KB66 452 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TRIML2Q8N7C3 387 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TM4SF19Q96DZ7 209 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 CHST8Q9H2A9 424 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 AGPAT4Q9NRZ5 378 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TAS2R9Q9NYW1 312 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 OR5K3A6NET4 321 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 P2RX6O15547 441 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 SH3BP5O60239 455 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TBX19O60806 448 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 GMNNO75496 209 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 PRKRAO75569 313 aaKnown RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 SCELO95171 688 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 BMP2P12643 396 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 CASP9P55211 416 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TUBA4AP68366 448 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 HPCAP84074 193 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 SLAMF1Q13291 335 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 SLC5A12Q1EHB4 618 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 NDUFAF5Q5TEU4 345 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 FRMPD2BQ6IN97 320 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 PPP4R4Q6NUP7 873 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 TRIM40Q6P9F5 258 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ENPP6Q6UWR7 440 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ASPGQ86U10 573 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ZZZ3Q8IYH5 903 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ARL14Q8N4G2 192 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 DUSP15Q9H1R2 295 aaPredicted RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 OLAHQ9NV23 265 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 RSL24D1Q9UHA3 163 aaKnown RBP19.19■□□□□ 0.66
NECAB3-213ENST00000488489 ASB4Q9Y574 426 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 KLK4Q9Y5K2 254 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 SNX11Q9Y5W9 270 aa19.19■□□□□ 0.66
NECAB3-213ENST00000488489 LOC105369274A0A096LPK9 316 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 LOC102723532A0A0G2JNH3 316 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 SDC3O75056 442 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 TRMUO75648 421 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 CERS1P27544 350 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 TRA2BP62995 288 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 COL9A2Q14055 689 aaPredicted RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 SLC9A5Q14940 896 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 RGNQ15493 299 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 NKG7Q16617 165 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.18■□□□□ 0.662e-7■■■□□ 17.1
NECAB3-213ENST00000488489 MRM1Q6IN84 353 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 GKN2Q86XP6 184 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 RBM12BQ8IXT5 1001 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 OR4N4Q8N0Y3 316 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 OR52E4Q8NGH9 312 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 FBXO30Q8TB52 745 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 BAHD1Q8TBE0 780 aaPredicted RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 FAM162AQ96A26 154 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 RMND5BQ96G75 393 aaPredicted RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 RNF145Q96MT1 663 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 SLC35A5Q9BS91 424 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 TMEM121BQ9BXQ6 578 aaPredicted RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 ACSL6Q9UKU0 697 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 ATG4BQ9Y4P1 393 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 FRYLO94915 3013 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 NOBOXO60393 691 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 GSTM5P46439 218 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 PCBP4P57723 403 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 STXBP1P61764 594 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 COX20Q5RI15 118 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 CPZQ66K79 652 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 ZBTB49Q6ZSB9 765 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 OR5AK3PQ8NH89 298 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 NCLNQ969V3 563 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 EXOSC8Q96B26 276 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 CHID1Q9BWS9 393 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 DCAF13Q9NV06 445 aaKnown RBP19.18■□□□□ 0.66
NECAB3-213ENST00000488489 UCKL1Q9NWZ5 548 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 DOLKQ9UPQ8 538 aa19.18■□□□□ 0.66
NECAB3-213ENST00000488489 ZDBF2Q9HCK1 2354 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 WDFY4Q6ZS81 3184 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 A0A1W2PR48 441 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 GLOD5A6NK44 160 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 AQP9O43315 295 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 RETP07949 1114 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 CDK4P11802 303 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 FASLGP48023 281 aa19.17■□□□□ 0.66
NECAB3-213ENST00000488489 CDK9P50750 372 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms