RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 M0R296 226 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 FPGTO14772 594 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 WDR46O15213 610 aaKnown RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 SPRY1O43609 319 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 IDH3BO43837 385 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 TBCAO75347 108 aaKnown RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 PGLSO95336 258 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 QDPRP09417 244 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 STAG3L1P0CL83 205 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 IL9P15248 144 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 PTAFRP25105 342 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 PIK3R1P27986 724 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 RGS7P49802 495 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 ZNF41P51814 821 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 XGP55808 180 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 MZT1Q08AG7 82 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 RASGEF1BQ0VAM2 473 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 GPR33Q49SQ1 333 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 CES4AQ5XG92 561 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 IL27RAQ6UWB1 636 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 SLFN11Q7Z7L1 901 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 DZIP1Q86YF9 867 aaKnown RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 KLHDC1Q8N7A1 406 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 ANKRD9Q96BM1 317 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-214ENST00000488427 SLC45A3Q96JT2 553 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 DNAJC4Q9NNZ3 241 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 PANK4Q9NVE7 773 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 MUTYHQ9UIF7 546 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 LIPGQ9Y5X9 500 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 MTCH2Q9Y6C9 303 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 PTPRFP10586 1907 aa3.66□□□□□ -1.82
ITGB1-214ENST00000488427 CYTIPO60759 359 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 DUS4LO95620 317 aaKnown RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 RPN1P04843 607 aaKnown RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 VIMP08670 466 aaKnown RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 TSPY3P0CV98 308 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 TSPY8P0CW00 308 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 SPP1P10451 314 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 CYP11B2P19099 503 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ZNF10P21506 573 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 OR3A3P47888 321 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 CAPZA1P52907 286 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 PPP5CP53041 499 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 VCPP55072 806 aaKnown RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 MFAP3P55082 362 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 UBASH3AP57075 661 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ERVK-16P61578 105 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 IRX6P78412 446 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 IL10RBQ08334 325 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 SLC39A6Q13433 755 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ZNF273Q14593 569 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 TMEM132DQ14C87 1099 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 LACTB2Q53H82 288 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ATP1A1-AS1Q5TC04 95 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 TTC27Q6P3X3 843 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 NRARPQ7Z6K4 114 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 DNAJB7Q7Z6W7 309 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ABI3BPQ7Z7G0 1075 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 P2RY8Q86VZ1 359 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 FAM222BQ8WU58 562 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 SPATA33Q96N06 139 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ATOH8Q96SQ7 321 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 IL12RB2Q99665 862 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 DEFB129Q9H1M3 183 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 RIMS4Q9H426 269 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-214ENST00000488427 FZD8Q9H461 694 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 PDRG1Q9NUG6 133 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 HACD3Q9P035 362 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 PAK5Q9P286 719 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ASIC3Q9UHC3 531 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 CREBBPQ92793 2442 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ABCC4O15439 1325 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 SH3TC1Q8TE82 1336 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 RALGAPA1Q6GYQ0 2036 aa3.65□□□□□ -1.83
ITGB1-214ENST00000488427 ITPR1Q14643 2758 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 A0A1B0GUL6 1792 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 TRBV4-1A0A0J9YWV2 114 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 ARHGEF37A1IGU5 675 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 HTR3EA5X5Y0 456 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 ERI2A8K979 691 aaKnown RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 C17orf105B2RV13 164 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 TCP10L2B9ZVM9 353 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 F8VVB4 439 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 F8VWA3 439 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 TRAFD1O14545 582 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 MTRF1O75570 445 aaKnown RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 BBOX1O75936 387 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 HPRP00739 348 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 PENKP01210 267 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 SERPING1P05155 500 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 ZSCAN5DPP0CG00 497 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 THEGLP0DJG4 465 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 AZGP1P25311 298 aaKnown RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CAPGP40121 348 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 PTGER3P43115 390 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 TNNT2P45379 298 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-214ENST00000488427 NAGLUP54802 743 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 CSNK2BP67870 215 aa3.64□□□□□ -1.83
ITGB1-214ENST00000488427 DHODHQ02127 395 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms