RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 PRSS58Q8IYP2 241 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZNF619Q8N2I2 560 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RASGEF1AQ8N9B8 481 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 ZSCAN1Q8NBB4 408 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 Q8NFD4 153 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 RXFP4Q8TDU9 374 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 MSLNLQ96KJ4 702 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 HHIPQ96QV1 700 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 OCSTAMPQ9BR26 566 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 EDEM2Q9BV94 578 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 TMUB1Q9BVT8 246 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 CLEC4MQ9H2X3 399 aaPredicted RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 EXOSC3Q9NQT5 275 aaKnown RBP6.1□□□□□ -1.43
SIK3-212ENST00000488337 GIMAP2Q9UG22 337 aa6.1□□□□□ -1.43
SIK3-212ENST00000488337 BPTFQ12830 3046 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SMCHD1A6NHR9 2005 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 KCNK1O00180 336 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SMAD6O43541 496 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 SEC22BO75396 215 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 APOC3P02656 99 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 OR56A5P0C7T3 313 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CBSLP0DN79 551 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CD46P15529 392 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ZNF44P15621 663 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 TFEBP19484 476 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 TFE3P19532 575 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 ANXA7P20073 488 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 HRH2P25021 359 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CBSP35520 551 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 TNFRSF9Q07011 255 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 BOP1Q14137 746 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 SLC9A5Q14940 896 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SYTL3Q4VX76 610 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 GLRA4Q5JXX5 417 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 MLIPQ5VWP3 458 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SLC25A24Q6NUK1 477 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ENTHD1Q8IYW4 607 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CBARPQ8N350 705 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 OR9A2Q8NGT5 310 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 RNASE11Q8TAA1 199 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 TFAP2BQ92481 460 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ARMC5Q96C12 935 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CCNL2Q96S94 520 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 PARD6GQ9BYG4 376 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 NXF3Q9H4D5 531 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 FOLH1BQ9HBA9 442 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CCNB1IP1Q9NPC3 277 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 AKAP7Q9P0M2 348 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 ZNF70Q9UC06 446 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 PTPRJQ12913 1337 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SCN9AQ15858 1988 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 GLTPD2A6NH11 291 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 MKRN2OSH3BPM6 223 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 TPST1O60507 370 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SRP72O76094 671 aaKnown RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 ANGPTL1O95841 491 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CHRNGP07510 517 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 QDPRP09417 244 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 HIST1H2AGP0C0S8 130 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 SBK3P0C264 359 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 SLC2A1P11166 492 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 HIST1H2ADP20671 130 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 GPD1P21695 349 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 PMELP40967 661 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 MAP2K3P46734 347 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 EFNA5P52803 228 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 GK2Q14410 553 aaPredicted RBP6.09□□□□□ -1.43
SIK3-212ENST00000488337 PRAMEF13Q5VWM6 474 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 MFSD14CQ5VZR4 134 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 STEAP4Q687X5 459 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 HIST2H2AA3Q6FI13 130 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 DEGS2Q6QHC5 323 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 FAM111BQ6SJ93 734 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 USP30Q70CQ3 517 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 LAX1Q8IWV1 398 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 OR10H5Q8NGA6 315 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.09□□□□□ -1.43
SIK3-212ENST00000488337 RXFP2Q8WXD0 754 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 CLEC4DQ8WXI8 215 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ATG4CQ96DT6 458 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ATXN7L3BQ96GX2 97 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 HIST1H2AHQ96KK5 128 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 COQ10AQ96MF6 247 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 HIST1H2AJQ99878 128 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ELOVL2Q9NXB9 296 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 OR12D3Q9UGF7 316 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 ZDHHC2Q9UIJ5 367 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 DLGAP4Q9Y2H0 992 aa6.09□□□□□ -1.43
SIK3-212ENST00000488337 MEIKINA0A087WXM9 373 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 KLRG2A4D1S0 409 aaPredicted RBP6.09□□□□□ -1.44
SIK3-212ENST00000488337 SLC15A5A6NIM6 579 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 COLCA2A8K830 154 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 GTPBP1O00178 669 aaKnown RBP6.09□□□□□ -1.44
SIK3-212ENST00000488337 ITGB1BP1O14713 200 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 RGS10O43665 173 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 DPM1O60762 260 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 FGF19O95750 216 aa6.09□□□□□ -1.44
SIK3-212ENST00000488337 FADS2O95864 444 aaKnown RBP6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms