RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	FOXA2	Q9Y261	457 aa	Predicted RBP	4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	MRC1	P22897	1456 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	DIP2B	Q9P265	1576 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	ADAMTS7	Q9UKP4	1686 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	CAMTA1	Q9Y6Y1	1673 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	PARP4	Q9UKK3	1724 aa	Known RBP	4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	OVOS2	A0A0G2JMS6	1433 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	USP6	P35125	1406 aa		4.21	□□□□□ -1.74
SRRM1-215	ENST00000488317	KIF1A	Q12756	1690 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	NWD1	Q149M9	1564 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SBNO1	A3KN83	1393 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	FLT4	P35916	1363 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	BMPR1B	O00238	502 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TEX28	O15482	410 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	NEMF	O60524	1076 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CYTIP	O60759	359 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CLN5	O75503	358 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	B3GALNT1	O75752	331 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CLPTM1	O96005	669 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SLC4A1	P02730	911 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CHRNG	P07510	517 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	GSTA2	P09210	222 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	KRT3	P12035	628 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	AREG	P15514	252 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	RPL35A	P18077	110 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	MAP2K2	P36507	400 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	DLX5	P56178	289 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	HUNK	P57058	714 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	DCDC1	P59894	354 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	PPP1R8	Q12972	351 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	ITGA9	Q13797	1035 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TMEM132D	Q14C87	1099 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	FAM76B	Q5HYJ3	339 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SLC27A4	Q6P1M0	643 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	RBM43	Q6ZSC3	357 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CNBD1	Q8NA66	436 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	RNF149	Q8NC42	400 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CCNY	Q8ND76	341 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	OR2T11	Q8NH01	316 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	APOBEC4	Q8WW27	367 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SLC13A3	Q8WWT9	602 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	DYRK2	Q92630	601 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	HAS2	Q92819	552 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	WBP2	Q969T9	261 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TBC1D31	Q96DN5	1066 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	C10orf90	Q96M02	699 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	LRRC2	Q9BYS8	371 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	DDX47	Q9H0S4	455 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TSPYL1	Q9H0U9	437 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	C1orf21	Q9H246	121 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SYTL2	Q9HCH5	934 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	GPN1	Q9HCN4	374 aa	Predicted RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	RNF186	Q9NXI6	227 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CGN	Q9P2M7	1197 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	EPHA6	Q9UF33	1036 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	UBQLN2	Q9UHD9	624 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TRMT6	Q9UJA5	497 aa	Known RBP	4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	SATB2	Q9UPW6	733 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	CHD4	Q14839	1912 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TTC41P	Q6P2S7	1318 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	TTC21A	Q8NDW8	1320 aa		4.2	□□□□□ -1.74
SRRM1-215	ENST00000488317	ECM29	Q5VYK3	1845 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	RFX7	Q2KHR2	1363 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	JCAD	Q9P266	1359 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317		A0A087WUV0	522 aa	Predicted RBP	4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	TRBV2	A0A0J9YWF9	115 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	MTMR11	A4FU01	709 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	CCDC69	A6NI79	296 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	SLC15A5	A6NIM6	579 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	PMS2P5	A8MQ11	134 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ZNF732	B4DXR9	585 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	KIF2A	O00139	706 aa	Predicted RBP	4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	TLR4	O00206	839 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	HIP1	O00291	1037 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	PCDH7	O60245	1069 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	KRT33A	O76009	404 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	EML2	O95834	649 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ALPP	P05187	535 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	HOXB7	P09629	217 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	NUDT17	P0C025	328 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ALPPL2	P10696	532 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ZNF18	P17022	549 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	SYT1	P21579	422 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	AADAC	P22760	399 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	CTNNA2	P26232	953 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	CLK1	P49759	484 aa	Known RBP	4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	SP3	Q02447	781 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	GIT2	Q14161	759 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	KRT31	Q15323	416 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	DUSP5	Q16690	384 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	LRRC37A5P	Q49AS3	106 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	TOR1AIP1	Q5JTV8	583 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ZNF790	Q6PG37	636 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	B3GLCT	Q6Y288	498 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	C17orf107	Q6ZR85	190 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	C15orf52	Q6ZUT6	534 aa	Known RBP	4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	TRMT11	Q7Z4G4	463 aa	Known RBP	4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	SMIM29	Q86T20	159 aa		4.19	□□□□□ -1.74
SRRM1-215	ENST00000488317	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms