RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PDCD2Q16342 344 aaPredicted RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 SMU1Q2TAY7 513 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM69BQ5VUD6 431 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 INO80CQ6PI98 192 aaPredicted RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 TMEM205Q6UW68 189 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 SHISA6Q6ZSJ9 500 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 WDR75Q8IWA0 830 aaKnown RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 PRSS58Q8IYP2 241 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 SNRNP27Q8WVK2 155 aaKnown RBP18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 TM4SF18Q96CE8 201 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 IP6K3Q96PC2 410 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 CSF3RQ99062 836 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 VN1R1Q9GZP7 353 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 CCDC134Q9H6E4 229 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 MEAF6Q9HAF1 191 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 PRDM9Q9NQV7 894 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 ATG4BQ9Y4P1 393 aa18.24■□□□□ 0.51
PCOLCE-208ENST00000487172 ATP6AP2A0A1C7CYW4 349 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 A0A1W2PR48 441 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 SYNDIG1LA6NDD5 238 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 TRPC5OSA6NMA1 111 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 SRRM3A6NNA2 597 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 NKX2-8O15522 239 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 PRMT3O60678 531 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 B4GALT2O60909 372 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 CTNSO60931 367 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 ALOX12BO75342 701 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 VPS4BO75351 444 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 ATP6AP2O75787 350 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 PRR35P0CG20 571 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 ACPPP15309 386 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 TLX1P31314 330 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 MDH1P40925 334 aaKnown RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 EFNA3P52797 238 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 IL10RAQ13651 578 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 MINDY4Q4G0A6 757 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 ATP6AP1LQ52LC2 224 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 RFTN2Q52LD8 501 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 C6orf136Q5SQH8 315 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 NOXRED1Q6NXP6 359 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 RAB43Q86YS6 212 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 EFCAB3Q8N7B9 438 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 C7orf57Q8NEG2 295 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 RBCK1Q9BYM8 510 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 NUF2Q9BZD4 464 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 RPF2Q9H7B2 306 aaKnown RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 PRTFDC1Q9NRG1 225 aa18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 MARCOQ9UEW3 520 aaPredicted RBP18.23■□□□□ 0.51
PCOLCE-208ENST00000487172 LOC102723996A0A087X1L8 192 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 ZNF195O14628 629 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 CDC123O75794 336 aaPredicted RBP18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 ANXA4P09525 319 aaPredicted RBP18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 KITP10721 976 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 HNRNPFP52597 415 aaKnown RBP18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 GUCY1A3Q02108 690 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 VAC14Q08AM6 782 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 GALNTL6Q49A17 601 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 MFSD4BQ5TF39 518 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 SCUBE1Q8IWY4 988 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM47BQ8NA70 645 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 TMEM52Q8NDY8 209 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 THAP4Q8WY91 577 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 TANKQ92844 425 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 TUBGCP3Q96CW5 907 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 WDR41Q9HAD4 459 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 TEX10Q9NXF1 929 aaPredicted RBP18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 CLDN16Q9Y5I7 305 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 SCN2AQ99250 2005 aa18.22■□□□□ 0.51
PCOLCE-208ENST00000487172 ASPMQ8IZT6 3477 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 IGKV3D-11A0A0A0MRZ8 115 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 GNG14A0A1W2PPG7 69 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 A0A1W2PQ72 361 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 C1orf226A1L170 272 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 TCP11X1B4DZS4 312 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 PEX11AO75192 247 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 TGDSO95455 350 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 AIFM1O95831 613 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 FURINP09958 794 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 C8orf89P0DMQ9 161 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 RPL38P63173 70 aaKnown RBP18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 BTG2P78543 158 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 ZNF763Q0D2J5 394 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 CDC20Q12834 499 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 MAD2L1Q13257 205 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 BIKQ13323 160 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 NDUFAF5Q5TEU4 345 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 C18orf63Q68DL7 685 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM47EQ6ZV65 393 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 LARP4Q71RC2 724 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 PPP1R32Q7Z5V6 425 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 PARP9Q8IXQ6 854 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 C16orf78Q8WTQ4 265 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 METTL21AQ8WXB1 218 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 VPS50Q96JG6 964 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 MAELQ96JY0 434 aaKnown RBP18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 PTCHD1Q96NR3 888 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 AKTIPQ9H8T0 292 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 FAM53CQ9NYF3 392 aa18.21■□□□□ 0.51
PCOLCE-208ENST00000487172 C19orf25Q9UFG5 118 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms