RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 STX4Q12846 297 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 CHAF1BQ13112 559 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 HHATQ5VTY9 493 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 ACSM2BQ68CK6 577 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 COMMD6Q7Z4G1 85 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 CUZD1Q86UP6 607 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 TANKQ92844 425 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
LIMS3-205ENST00000487150 ABHD17AQ96GS6 310 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 SHCBP1LQ9BZQ2 653 aa13.76□□□□□ -0.21
LIMS3-205ENST00000487150 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 SLC28A1O00337 649 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 UBFD1O14562 309 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 AZIN1O14977 448 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 DNAJB5O75953 348 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 RSL1D1O76021 490 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 ETHE1O95571 254 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TAS2R50P59544 299 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 MAGOHP61326 146 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TRA2BP62995 288 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 PLIN5Q00G26 463 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 PCOLCEQ15113 449 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 AGAP7PQ5VUJ5 663 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 OR52E8Q6IFG1 317 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TRIM46Q7Z4K8 759 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TRIM42Q8IWZ5 723 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 FAM76AQ8TAV0 307 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 AGAP4Q96P64 663 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 SMAD5Q99717 465 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 MAPKAP1Q9BPZ7 522 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 MECRQ9BV79 373 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 MRPL1Q9BYD6 325 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 ACPTQ9BZG2 426 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 EPS8L2Q9H6S3 715 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 RPF2Q9H7B2 306 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 ADAP2Q9NPF8 381 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 FARSBQ9NSD9 589 aaKnown RBP13.75□□□□□ -0.21
LIMS3-205ENST00000487150 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 FER1L5A0AVI2 2057 aa13.75□□□□□ -0.21
LIMS3-205ENST00000487150 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 RGS14O43566 566 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 DPM1O60762 260 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 MYO1DO94832 1006 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 KLK1P06870 262 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 FGF4P08620 206 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 DHRS4L1P0CG22 281 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 CREB1P16220 341 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 MAOAP21397 527 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 ELAVL1Q15717 326 aaKnown RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 BTBD16Q32M84 506 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 ARL13AQ5H913 290 aaPredicted RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 CRB2Q5IJ48 1285 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 SPDYAQ5MJ70 313 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 PCSK4Q6UW60 755 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 ASB18Q6ZVZ8 466 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 SAMD14Q8IZD0 417 aaPredicted RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 CLYBLQ8N0X4 340 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 TMEM132CQ8N3T6 1108 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 RNF175Q8N4F7 328 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 SLC5A8Q8N695 610 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 EXD3Q8N9H8 876 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 M1APQ8TC57 530 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 DAZLQ92904 295 aaKnown RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 TSLPQ969D9 159 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 THOC3Q96J01 351 aaKnown RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 MLXIPLQ9NP71 852 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 MMP25Q9NPA2 562 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 ABI3Q9P2A4 366 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 MCM8Q9UJA3 840 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 WBP11Q9Y2W2 641 aaKnown RBP13.74□□□□□ -0.21
LIMS3-205ENST00000487150 TIMM22Q9Y584 194 aa13.74□□□□□ -0.21
LIMS3-205ENST00000487150 CACNA1GO43497 2377 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 A6NL46 340 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 HMGB1P1B2RPK0 211 aaPredicted RBP13.73□□□□□ -0.21
LIMS3-205ENST00000487150 FAM227AF5H4B4 570 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 CDK2AP1O14519 115 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 PROM1O43490 865 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
LIMS3-205ENST00000487150 SEC24DO94855 1032 aaPredicted RBP13.73□□□□□ -0.21
LIMS3-205ENST00000487150 HSPA4LO95757 839 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 PRR35P0CG20 571 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 LY6DQ14210 128 aa13.73□□□□□ -0.21
LIMS3-205ENST00000487150 CHI3L2Q15782 390 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms