RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 SUPT7LO94864 414 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ETHE1O95571 254 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 GSTA1P08263 222 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ATP5F1P24539 256 aaPredicted RBP20.94■□□□□ 0.94
CDHR3-212ENST00000487084 HSD17B3P37058 310 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ID2Q02363 134 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 IFT88Q13099 833 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 NR6A1Q15406 480 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 SGO1Q5FBB7 561 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 FRG2Q64ET8 278 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 FRG2BQ96QU4 278 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ELOVL6Q9H5J4 265 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 CDCP1Q9H5V8 836 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 PPCSQ9HAB8 311 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ADAP2Q9NPF8 381 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 AGPAT4Q9NRZ5 378 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 ANKRD10Q9NXR5 420 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 DCDC2Q9UHG0 476 aa20.94■□□□□ 0.94
CDHR3-212ENST00000487084 A0A1B0GTL3 188 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 FOXE1O00358 373 aaPredicted RBP20.93■□□□□ 0.94
CDHR3-212ENST00000487084 CLCQ05315 142 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 MRPL49Q13405 166 aaKnown RBP20.93■□□□□ 0.94
CDHR3-212ENST00000487084 CUL3Q13618 768 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 GGTA1PQ4G0N0 100 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 ZNF678Q5SXM1 525 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 NFAM1Q8NET5 270 aaPredicted RBP20.93■□□□□ 0.94
CDHR3-212ENST00000487084 B3GNT7Q8NFL0 401 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 GRHL3Q8TE85 626 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 TMEM237Q96Q45 408 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 SERPINI1Q99574 410 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 NPAS2Q99743 824 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 C1QTNF3Q9BXJ4 246 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 ALOXE3Q9BYJ1 711 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 DEFB126Q9BYW3 111 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 CLDN16Q9Y5I7 305 aa20.93■□□□□ 0.94
CDHR3-212ENST00000487084 SHANK1Q9Y566 2161 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 TRBV11-1A0A0K0K1C0 115 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 GABRR3A8MPY1 467 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 GLRA3O75311 464 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 EEDO75530 441 aaKnown RBP20.92■□□□□ 0.94
CDHR3-212ENST00000487084 TERF2Q15554 542 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 UNC50Q53HI1 259 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 FAM219BQ5XKK7 198 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 LETMD1Q6P1Q0 360 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 CYP20A1Q6UW02 462 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 FAM180AQ6UWF9 173 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 GPR180Q86V85 440 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 RPS19BP1Q86WX3 136 aaKnown RBP20.92■□□□□ 0.94
CDHR3-212ENST00000487084 TDRPQ86YL5 185 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 SLC22A9Q8IVM8 553 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 ZCCHC7Q8N3Z6 543 aaKnown RBP20.92■□□□□ 0.94
CDHR3-212ENST00000487084 NCLNQ969V3 563 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 UTP23Q9BRU9 249 aaKnown RBP20.92■□□□□ 0.94
CDHR3-212ENST00000487084 PHF11Q9UIL8 331 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 CLCA3PQ9Y6N3 262 aa20.92■□□□□ 0.94
CDHR3-212ENST00000487084 TLDC2A0PJX2 215 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 BLACEA4D250 179 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 SYNDIG1LA6NDD5 238 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 ESPNB1AK53 854 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 PRAMEF2O60811 474 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 OR4F21O95013 312 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 TNNI3P19429 210 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 TLX1P31314 330 aaPredicted RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 BSGP35613 385 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 CLCN2P51788 898 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 ARFIP1P53367 373 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 HNRNPH2P55795 449 aaKnown RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 OC90Q02509 493 aaPredicted RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 TUBA3CQ13748 450 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 ELAVL1Q15717 326 aaKnown RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 C18orf63Q68DL7 685 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 TUBA3EQ6PEY2 450 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 NUDT13Q86X67 352 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 OR4N5Q8IXE1 308 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 CPAMD8Q8IZJ3 1885 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 OR2W6PQ8NHA6 318 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 THAP3Q8WTV1 239 aaPredicted RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 SELENOMQ8WWX9 145 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 ZNF717Q9BY31 904 aaPredicted RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 RPF2Q9H7B2 306 aaKnown RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 LYARQ9NX58 379 aaKnown RBP20.91■□□□□ 0.94
CDHR3-212ENST00000487084 MS4A12Q9NXJ0 267 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 PSD3Q9NYI0 1048 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 TRPS1Q9UHF7 1281 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 SNX6Q9UNH7 406 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 ATG4BQ9Y4P1 393 aa20.91■□□□□ 0.94
CDHR3-212ENST00000487084 A0A0A6YYD5 115 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 TMPRSS11DO60235 418 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 FGF17O60258 216 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 CDH16O75309 829 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 PRKRAO75569 313 aaKnown RBP20.9■□□□□ 0.94
CDHR3-212ENST00000487084 GBAP04062 536 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 BUD31P41223 144 aaPredicted RBP20.9■□□□□ 0.94
CDHR3-212ENST00000487084 PRKAA2P54646 552 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 TNFRSF17Q02223 184 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 SERTAD2Q14140 314 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 OR1C1Q15619 314 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 ZNF766Q5HY98 468 aa20.9■□□□□ 0.94
CDHR3-212ENST00000487084 C10orf62Q5T681 223 aaPredicted RBP20.9■□□□□ 0.94
CDHR3-212ENST00000487084 RPUSD3Q6P087 351 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms