RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 CCDC3Q9BQI4 270 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SLC35A5Q9BS91 424 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 UGT2B28Q9BY64 529 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 KLHL4Q9C0H6 718 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 AICDAQ9GZX7 198 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 RAB33BQ9H082 229 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TSPAN10Q9H1Z9 355 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 KLHL31Q9H511 634 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 YY1AP1Q9H869 796 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CAAP1Q9H8G2 361 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 GORASP2Q9H8Y8 452 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NEUROD4Q9HD90 331 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 C1GALT1Q9NS00 363 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ACSS1Q9NUB1 689 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 CCM2LQ9NUG4 571 aaPredicted RBP6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ARMC1Q9NVT9 282 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ZSCAN32Q9NX65 697 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 MS4A12Q9NXJ0 267 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TAS2R7Q9NYW3 318 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ANAPC2Q9UJX6 822 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 PILRAQ9UKJ1 303 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FBXO4Q9UKT5 387 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 FBXW2Q9UKT8 454 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 AURKCQ9UQB9 309 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 ENTPD4Q9Y227 616 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 C15orf41Q9Y2V0 281 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 NEUROG3Q9Y4Z2 214 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 SPACA6W5XKT8 324 aa6.69□□□□□ -1.34
SF3A3-206ENST00000487062 TCRBV5S2A0A599 114 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TLCD2A6NGC4 264 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 H0YGG7 62 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NUDT21O43809 227 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 B3GALT2O43825 422 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 PEX1O43933 1283 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SRPX2O60687 465 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CREG1O75629 220 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 B3GALT4O96024 378 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 RETP07949 1114 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SMIM10L1P0DMW3 83 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 PVRP15151 417 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ST6GAL1P15907 406 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 GLB1P16278 677 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ALOX12P18054 663 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CPN2P22792 545 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 FASP25445 335 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CERS1P27544 350 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TLX1P31314 330 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 GPC1P35052 558 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 HOXD12P35452 270 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SOAT1P35610 550 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 FRKP42685 505 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 GPR3P46089 330 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 GZMMP51124 257 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ARF3P61204 181 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 HBA1P69905 142 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CHRNB3Q05901 458 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 RBBP4Q09028 425 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SPIDRQ14159 915 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 MLC1Q15049 377 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 RGNQ15493 299 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TAF11Q15544 211 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NDUFA9Q16795 377 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 VMACQ2NL98 169 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 GRAMD1BQ3KR37 738 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 FRMPD2BQ6IN97 320 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NIPAL1Q6NVV3 410 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ZCCHC8Q6NZY4 707 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SLC30A8Q8IWU4 369 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SAMD14Q8IZD0 417 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ADGRG5Q8IZF4 528 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 EID3Q8N140 333 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CARFQ8N187 725 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 DTWD1Q8N5C7 304 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CSNK1A1LQ8N752 337 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ARL10Q8N8L6 244 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 DTWD2Q8NBA8 298 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 KCT2Q8NC54 265 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ADCY4Q8NFM4 1077 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 OR6C4Q8NGE1 309 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 OR52N2Q8NGI0 321 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CEP76Q8TAP6 659 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ZCCHC10Q8TBK6 192 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 NRG4Q8WWG1 115 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 DNAJC9Q8WXX5 260 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 CIDECQ96AQ7 238 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 EXOSC8Q96B26 276 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 PPWD1Q96BP3 646 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 ZDHHC12Q96GR4 267 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 SMIM10Q96HG1 83 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 FCRL4Q96PJ5 515 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 TRAPPC9Q96Q05 1148 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 MACROD1Q9BQ69 325 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 DUSP23Q9BVJ7 150 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 KLHL25Q9H0H3 589 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 VCXQ9H320 206 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 IKZF5Q9H5V7 419 aa6.68□□□□□ -1.34
SF3A3-206ENST00000487062 RPF2Q9H7B2 306 aaKnown RBP6.68□□□□□ -1.34
SF3A3-206ENST00000487062 IL21RQ9HBE5 538 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms