RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 TRMOQ9BU70 441 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 TGIF2Q9GZN2 237 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 C20orf27Q9GZN8 174 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 NSRP1Q9H0G5 558 aaKnown RBP8.65□□□□□ -1.02
CCDC142-208ENST00000486335 PARVBQ9HBI1 364 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 KLHL1Q9NR64 748 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 FGFR1OP2Q9NVK5 253 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 ANKRD10Q9NXR5 420 aa8.65□□□□□ -1.02
CCDC142-208ENST00000486335 HRNRQ86YZ3 2850 aaPredicted RBP8.65□□□□□ -1.03
CCDC142-208ENST00000486335 NBEAL1Q6ZS30 2694 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ZNF407Q9C0G0 2248 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ANK3Q12955 4377 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 A0A0J9YVX5 310 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 NPEPPSL1A6NEC2 478 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 A8MUI8 341 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 UBXN8O00124 270 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 NDUFAB1O14561 156 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ITM2AO43736 263 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 SNX3O60493 162 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PSIP1O75475 530 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 CTAG2O75638 210 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ARRB2P32121 409 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PTGER1P34995 402 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 GGT5P36269 586 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 HERVK_113P63132 956 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ALDH6A1Q02252 535 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ZNF33BQ06732 778 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.036e-12■■■□□ 18.7
CCDC142-208ENST00000486335 CEBPEQ15744 281 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 UNC50Q53HI1 259 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ZC3H12BQ5HYM0 836 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ZNF678Q5SXM1 525 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ABHD17BQ5VST6 288 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 TMEM198Q66K66 360 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 SULT1C3Q6IMI6 304 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 CGB2Q6NT52 195 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PRMT9Q6P2P2 845 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 LANCL3Q6ZV70 420 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 RNF44Q7L0R7 432 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 GALNTL5Q7Z4T8 443 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 CRLF3Q8IUI8 442 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 CCDC71Q8IV32 467 aaPredicted RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 TTC29Q8NA56 475 aaPredicted RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PDPRQ8NCN5 879 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 FBXO15Q8NCQ5 510 aaPredicted RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 OR2A1Q8NGT9 310 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 OR2L8Q8NGY9 312 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ZNF473Q8WTR7 871 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 VPS50Q96JG6 964 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 SORT1Q99523 831 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ERVK-6Q9BXR3 956 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 RIC8BQ9NVN3 520 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 NUDT4Q9NZJ9 180 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 KCNN3Q9UGI6 736 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ST6GALNAC2Q9UJ37 374 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PTBP2Q9UKA9 531 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 ADAMTS6Q9UKP5 1117 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 PPT2Q9UMR5 302 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 RNF6Q9Y252 685 aa8.64□□□□□ -1.03
CCDC142-208ENST00000486335 TNPO3Q9Y5L0 923 aaKnown RBP8.64□□□□□ -1.03
CCDC142-208ENST00000486335 IGKV1-8A0A0C4DH67 115 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 H0YGG7 62 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 SEC24DO94855 1032 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 FGF4P08620 206 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 GFAPP14136 432 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 HNMTP50135 292 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 HK2P52789 917 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 AP1S2P56377 157 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ARF3P61204 181 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 MAT1AQ00266 395 aaKnown RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 DSG2Q14126 1118 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 RCN2Q14257 317 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 SETDB1Q15047 1291 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 OR1C1Q15619 314 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 SF1Q15637 639 aaKnown RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PHKG1Q16816 387 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PFKFB4Q16877 469 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ARL13AQ5H913 290 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 GKAP1Q5VSY0 366 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PLAG1Q6DJT9 500 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ZCCHC23Q6ZST2 131 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 FAM47EQ6ZV65 393 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 UBE2R2Q712K3 238 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 KIRREL3Q8IZU9 778 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 GHDCQ8N2G8 530 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 TCAIMQ8N3R3 496 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PTGR2Q8N8N7 351 aaPredicted RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ANKS4BQ8N8V4 417 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 WFDC11Q8NEX6 87 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PIWIL2Q8TC59 973 aaKnown RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 MCOLN3Q8TDD5 553 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 STON2Q8WXE9 905 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 RHBDF1Q96CC6 855 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 PHF21BQ96EK2 531 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 TMEM237Q96Q45 408 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ELAC2Q9BQ52 826 aaKnown RBP8.63□□□□□ -1.03
CCDC142-208ENST00000486335 ZNF559Q9BR84 538 aa8.63□□□□□ -1.03
CCDC142-208ENST00000486335 SIKE1Q9BRV8 207 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms