RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RPS17P08708 135 aaKnown RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 GPR143P51810 404 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 NEK2P51955 445 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 TERF2Q15554 542 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ZRSR2Q15696 482 aaKnown RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 INAQ16352 499 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 TEX35Q5T0J7 233 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ZNF324BQ6AW86 544 aaPredicted RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 LGI4Q8N135 537 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 BCORP1Q8N888 145 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 EIF1ADQ8N9N8 165 aaKnown RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 MDS2Q8NDY4 140 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 B3GNT7Q8NFL0 401 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 RGMAQ96B86 450 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 REPS1Q96D71 796 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 SLX1AQ9BQ83 275 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 NTMT1Q9BV86 223 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ZNF717Q9BY31 904 aaPredicted RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 TMEM216Q9P0N5 145 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ABI3Q9P2A4 366 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 FETUBQ9UGM5 382 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 ZNF223Q9UK11 482 aaPredicted RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 FBXW2Q9UKT8 454 aa18.26■□□□□ 0.51
SNX5-213ENST00000486039 PPIEQ9UNP9 301 aaKnown RBP18.26■□□□□ 0.51
SNX5-213ENST00000486039 IQANK1A0A1B0GTG1 560 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 A8MT66 165 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 LDB3O75112 727 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 PTX3P26022 381 aaPredicted RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 CCNG1P51959 295 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 RAP1GDS1P52306 607 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 SRSF11Q05519 484 aaKnown RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 TRAF3Q13114 568 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 SLAMF1Q13291 335 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 ZNF766Q5HY98 468 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 ZNF468Q5VIY5 522 aaPredicted RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 SPINK14Q6IE38 97 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 SUN3Q8TAQ9 357 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 MZB1Q8WU39 189 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 UTP23Q9BRU9 249 aaKnown RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 HES7Q9BYE0 225 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 ALOXE3Q9BYJ1 711 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 ADAP2Q9NPF8 381 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 SEMA4BQ9NPR2 832 aaPredicted RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 OLAHQ9NV23 265 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 PSD3Q9NYI0 1048 aa18.25■□□□□ 0.51
SNX5-213ENST00000486039 PSMC3IPQ9P2W1 217 aaPredicted RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 ERRFI1Q9UJM3 462 aaPredicted RBP18.25■□□□□ 0.51
SNX5-213ENST00000486039 A0A1B0GTL3 188 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 A1L4Q6 167 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 WIPF3A6NGB9 483 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 PPP6CO00743 305 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 RASAL1O95294 804 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 EDN3P14138 238 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 CPN2P22792 545 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 TPP2P29144 1249 aaPredicted RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 CLCN2P51788 898 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 ARFIP1P53367 373 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 MLF1P58340 268 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 PHEXP78562 749 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 ELOAQ14241 798 aaKnown RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 OR1C1Q15619 314 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 ARMC10Q8N2F6 343 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 ZCCHC7Q8N3Z6 543 aaKnown RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 ZNF483Q8TF39 744 aaPredicted RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 NCLNQ969V3 563 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 ANKRD9Q96BM1 317 aaPredicted RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 MTFMTQ96DP5 389 aaKnown RBP18.24■□□□□ 0.51
SNX5-213ENST00000486039 CENPKQ9BS16 269 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 C1QTNF3Q9BXJ4 246 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 DEFB126Q9BYW3 111 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 VTI1BQ9UEU0 232 aa18.24■□□□□ 0.51
SNX5-213ENST00000486039 HIVEP3Q5T1R4 2406 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 TRBV11-1A0A0K0K1C0 115 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 GOLGA8RI6L899 631 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 FOXE1O00358 373 aaPredicted RBP18.23■□□□□ 0.51
SNX5-213ENST00000486039 NEURL1O76050 574 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 LDLRP01130 860 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 SHBGP04278 402 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 BSGP35613 385 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 ARL1P40616 181 aaPredicted RBP18.23■□□□□ 0.51
SNX5-213ENST00000486039 TDGF1P3P51864 188 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 CDH13P55290 713 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 HNRNPH2P55795 449 aaKnown RBP18.23■□□□□ 0.51
SNX5-213ENST00000486039 ID2Q02363 134 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 STX4Q12846 297 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 CUL3Q13618 768 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 ELAVL1Q15717 326 aaKnown RBP18.23■□□□□ 0.51
SNX5-213ENST00000486039 OR4F6Q8NGB9 312 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 PTPMT1Q8WUK0 201 aaPredicted RBP18.23■□□□□ 0.51
SNX5-213ENST00000486039 VMP1Q96GC9 406 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 SCMH1Q96GD3 660 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 TBK1Q9UHD2 729 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 PPT2Q9UMR5 302 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 SLC5A6Q9Y289 635 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 ATG4BQ9Y4P1 393 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 PCDHGB6Q9Y5F9 930 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 SPACA6W5XKT8 324 aa18.23■□□□□ 0.51
SNX5-213ENST00000486039 SYNDIG1LA6NDD5 238 aa18.22■□□□□ 0.51
SNX5-213ENST00000486039 FGF17O60258 216 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms