RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 IGKV3-11P04433 115 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 OR3A3P47888 321 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 ADARP55265 1226 aaKnown RBP2.5□□□□□ -2.01
GCFC2-209ENST00000486016 RBBP4Q09028 425 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 CNTN1Q12860 1018 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF273Q14593 569 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 ISXQ2M1V0 245 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 PLPP4Q5VZY2 271 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 REP15Q6BDI9 236 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 TRAT1Q6PIZ9 186 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 ERN2Q76MJ5 926 aaKnown RBP2.5□□□□□ -2.01
GCFC2-209ENST00000486016 TBC1D10CQ8IV04 446 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 CCDC71Q8IV32 467 aaPredicted RBP2.5□□□□□ -2.01
GCFC2-209ENST00000486016 MFN1Q8IWA4 741 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 NKAIN3Q8N8D7 197 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF564Q8TBZ8 553 aaPredicted RBP2.5□□□□□ -2.01
GCFC2-209ENST00000486016 SIPA1Q96FS4 1042 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 SP140LQ9H930 580 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 RPF1Q9H9Y2 349 aaKnown RBP2.5□□□□□ -2.01
GCFC2-209ENST00000486016 SH3GLB2Q9NR46 395 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 MOKQ9UQ07 419 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 FBXO7Q9Y3I1 522 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 LIPGQ9Y5X9 500 aa2.5□□□□□ -2.01
GCFC2-209ENST00000486016 MEGF6O75095 1541 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF487B1APH4 448 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 KRTAP4-16G5E9R7 235 aaPredicted RBP2.49□□□□□ -2.01
GCFC2-209ENST00000486016 P2RX6O15547 441 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 TBCAO75347 108 aaKnown RBP2.49□□□□□ -2.01
GCFC2-209ENST00000486016 RHBDL1O75783 438 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 LUC7L3O95232 432 aaKnown RBP2.49□□□□□ -2.01
GCFC2-209ENST00000486016 SCG2P13521 617 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 IFNAR1P17181 557 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 SSTR1P30872 391 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 HSPA4P34932 840 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 BRCC3P46736 316 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 SLC1A6P48664 564 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 NPY4RP50391 375 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 UCNP55089 124 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 PEX3P56589 373 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 ROR1Q01973 937 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 MAPK11Q15759 364 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 KLHL10Q6JEL2 608 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 PPP1R21Q6ZMI0 780 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 FAM219AQ8IW50 185 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 THNSL1Q8IYQ7 743 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 CCAR2Q8N163 923 aaKnown RBP2.49□□□□□ -2.01
GCFC2-209ENST00000486016 SMPDL3AQ92484 453 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 ANKRD27Q96NW4 1050 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 RAB3IPQ96QF0 476 aaPredicted RBP2.49□□□□□ -2.01
GCFC2-209ENST00000486016 NMUR1Q9HB89 426 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 PFDN4Q9NQP4 134 aa2.49□□□□□ -2.01
GCFC2-209ENST00000486016 CCDC188H7C350 402 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 TNFSF11O14788 317 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 PGRMC2O15173 223 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 SCO2O43819 266 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 KRT3P12035 628 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 SKILP12757 684 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF17P17021 662 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 GP5P40197 560 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 MZT1Q08AG7 82 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 PPA1Q15181 289 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF770Q6IQ21 691 aaPredicted RBP2.48□□□□□ -2.01
GCFC2-209ENST00000486016 CAVIN1Q6NZI2 390 aaKnown RBP2.48□□□□□ -2.01
GCFC2-209ENST00000486016 SLC27A4Q6P1M0 643 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 DCLRE1AQ6PJP8 1040 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 GALNTL5Q7Z4T8 443 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 ADCK2Q7Z695 626 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 IQUBQ8NA54 791 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 SPATA17Q96L03 361 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 GBP5Q96PP8 586 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 MAPKAP1Q9BPZ7 522 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 KATNB1Q9BVA0 655 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 HES7Q9BYE0 225 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 UBQLN3Q9H347 655 aa2.48□□□□□ -2.01
GCFC2-209ENST00000486016 CHCHD3Q9NX63 227 aaKnown RBP2.48□□□□□ -2.01
GCFC2-209ENST00000486016 HBS1LQ9Y450 684 aaKnown RBP2.48□□□□□ -2.01
GCFC2-209ENST00000486016 CFAP65Q6ZU64 1925 aaKnown RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ANXA2P2A6NMY6 339 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 SAP18O00422 153 aaKnown RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 DLATP10515 647 aaKnown RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 PSMA3P25788 255 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 CXCL6P80162 114 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 SCARB2Q14108 478 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 KIAA0040Q15053 153 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 RFTN2Q52LD8 501 aaPredicted RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 C6orf136Q5SQH8 315 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF544Q6NX49 715 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 DNAJB7Q7Z6W7 309 aaPredicted RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ANKRD23Q86SG2 305 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 GLRX5Q86SX6 157 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 METTL23Q86XA0 190 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ZNF491Q8N8L2 437 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 SETD6Q8TBK2 473 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 FAM104AQ969W3 186 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ZBED6CLQ96FA7 236 aaPredicted RBP2.47□□□□□ -2.01
GCFC2-209ENST00000486016 RMDN2Q96LZ7 410 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 ADPGKQ9BRR6 497 aa2.47□□□□□ -2.01
GCFC2-209ENST00000486016 GTPBP2Q9BX10 602 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms