RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 BGNP21810 368 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 ITGA3P26006 1051 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 TPP2P29144 1249 aaPredicted RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 ARRB2P32121 409 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 SERPINB5P36952 375 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 HSD17B7P56937 341 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 OR4D2P58180 307 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 TNFRSF17Q02223 184 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 BTKQ06187 659 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 GALNT1Q10472 559 aaPredicted RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 SLC13A2Q13183 592 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 KCNAB2Q13303 367 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 PCOLCEQ15113 449 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 SPDYAQ5MJ70 313 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 CCNYL2Q5T2Q4 361 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 CES4AQ5XG92 561 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 NDUFAF7Q7L592 441 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 CPEB2Q7Z5Q1 589 aaKnown RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 GPR180Q86V85 440 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 APLFQ8IW19 511 aaPredicted RBP11.13□□□□□ -0.63
HPS4-214ENST00000485842 ZNF595Q8IYB9 648 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 EXD3Q8N9H8 876 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 PLPP5Q8NEB5 264 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 NECTIN3Q9NQS3 549 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 RIC8BQ9NVN3 520 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 VPS29Q9UBQ0 182 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 ATG4BQ9Y4P1 393 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 MMACHCQ9Y4U1 282 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 PTGDR2Q9Y5Y4 395 aa11.13□□□□□ -0.63
HPS4-214ENST00000485842 ZFYVE26Q68DK2 2539 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 LOC102723996A0A087X1L8 192 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 A8MUA0 341 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 TMEM114B3SHH9 223 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 MKRN2OSH3BPM6 223 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ATXN7O15265 892 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 ITM2AO43736 263 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 LDB3O75112 727 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 PRKRAO75569 313 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 AIFM1O95831 613 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 CELA2AP08217 269 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 NR2F6P10588 404 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 TLX1P31314 330 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 BUD31P41223 144 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 MAPK12P53778 367 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 WDR4P57081 412 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 ID2Q02363 134 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ZNF33BQ06732 778 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ACTN3Q08043 901 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 ACSM2AQ08AH3 577 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 TBL3Q12788 808 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 AIMP2Q13155 320 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 IRAK1BP1Q5VVH5 260 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 KANK2Q63ZY3 851 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ACSM2BQ68CK6 577 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 C18orf63Q68DL7 685 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 MRM1Q6IN84 353 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 PAPD4Q6PIY7 484 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 ATG14Q6ZNE5 492 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 SCUBE1Q8IWY4 988 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 DDIASQ8IXT1 998 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 GALNT16Q8N428 558 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 AMER2Q8N7J2 671 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 OR6Y1Q8NGX8 325 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 C9orf43Q8TAL5 461 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 APIPQ96GX9 242 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 SH3GL2Q99962 352 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 SLC25A23Q9BV35 468 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 EBPLQ9BY08 206 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ZNF700Q9H0M5 742 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ACBD3Q9H3P7 528 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 WDR41Q9HAD4 459 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 PNO1Q9NRX1 252 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 TEX10Q9NXF1 929 aaPredicted RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 MS4A12Q9NXJ0 267 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 ADAM29Q9UKF5 820 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
HPS4-214ENST00000485842 TRAF6Q9Y4K3 522 aa11.12□□□□□ -0.63
HPS4-214ENST00000485842 NBEAQ8NFP9 2946 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 IGKV3D-11A0A0A0MRZ8 115 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 GNG14A0A1W2PPG7 69 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 A0A1W2PR48 441 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 TCRBV16S1A1N1A0A5B0 115 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 GLOD5A6NK44 160 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 HMGB1P1B2RPK0 211 aaPredicted RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 PCDH7O60245 1069 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 FGF17O60258 216 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 SKAP2O75563 359 aaPredicted RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 LINC00032P0C843 101 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 NR1D1P20393 614 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 PPP2R1BP30154 601 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 ABCE1P61221 599 aaKnown RBP11.11□□□□□ -0.63
HPS4-214ENST00000485842 Q0VFX4 171 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 STX4Q12846 297 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 STX3Q13277 289 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 NR6A1Q15406 480 aa11.11□□□□□ -0.63
HPS4-214ENST00000485842 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms