RNA–Protein interactions for RNA: ENST00000485578.1

PKDCC-207, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 2

Gene PKDCC, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-207ENST00000485578 COPS7BQ9H9Q2 264 aaPredicted RBP13.2□□□□□ -0.3
PKDCC-207ENST00000485578 TNFRSF12AQ9NP84 129 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 PLA2G3Q9NZ20 509 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 PTGFRNQ9P2B2 879 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 MAP10Q9P2G4 905 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 TMCO1Q9UM00 188 aa13.2□□□□□ -0.3
PKDCC-207ENST00000485578 WDR91A4D1P6 747 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 B3GALT2O43825 422 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 SUPT7LO94864 414 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 CLDN9O95484 217 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 IGHEP01854 428 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 CD63P08962 238 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 PRR35P0CG20 571 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 ATP5A1P25705 553 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 RAP1GDS1P52306 607 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 LIM2P55344 173 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 HNRNPH2P55795 449 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 GUCY1A3Q02108 690 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 LAPTM5Q13571 262 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 MYBPC3Q14896 1274 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 NSDHLQ15738 373 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 ZNF678Q5SXM1 525 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 KHDRBS2Q5VWX1 349 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 LIPMQ5VYY2 423 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 PAPD4Q6PIY7 484 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 NUDCD3Q8IVD9 361 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 OR4N5Q8IXE1 308 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 CDYL2Q8N8U2 506 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 L3MBTL4Q8NA19 623 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 CKAP2Q8WWK9 683 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 METTL21AQ8WXB1 218 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 OXSMQ9NWU1 459 aa13.19□□□□□ -0.3
PKDCC-207ENST00000485578 TNPO3Q9Y5L0 923 aaKnown RBP13.19□□□□□ -0.3
PKDCC-207ENST00000485578 RP1L1Q8IWN7 2480 aaPredicted RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 LOC102723996A0A087X1L8 192 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 A0A1W2PS29 197 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PSMD12O00232 456 aaPredicted RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TMPRSS11DO60235 418 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TRIM13O60858 407 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 LDB3O75112 727 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PDYNP01213 254 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 NEFHP12036 1026 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PTGER1P34995 402 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PRKAA2P54646 552 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 FOXA1P55317 472 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 OR4D2P58180 307 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 DNAJB13P59910 316 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 HERVK_113P63132 956 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 CLCQ05315 142 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 ASPHQ12797 758 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 BTBD16Q32M84 506 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 VWA5B1Q5TIE3 1220 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 C18orf63Q68DL7 685 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TTC19Q6DKK2 380 aaPredicted RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 NDUFAF7Q7L592 441 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 MILR1Q7Z6M3 343 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TRIM42Q8IWZ5 723 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 MMP21Q8N119 569 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TTLQ8NG68 377 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PSMF1Q92530 271 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 IP6K3Q96PC2 410 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 ERVK-6Q9BXR3 956 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 ZNF717Q9BY31 904 aaPredicted RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 MRPL1Q9BYD6 325 aaKnown RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 GSTO2Q9H4Y5 243 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 TIMM22Q9Y584 194 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PCDHGA9Q9Y5G4 932 aaKnown RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 CLDN16Q9Y5I7 305 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 UNC79Q9P2D8 2635 aa13.18□□□□□ -0.3
PKDCC-207ENST00000485578 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
PKDCC-207ENST00000485578 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 URADA6NGE7 173 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 GLOD5A6NK44 160 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 A8MUI8 341 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 UBFD1O14562 309 aaKnown RBP13.17□□□□□ -0.3
PKDCC-207ENST00000485578 PRMT3O60678 531 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 MTTPP55157 894 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 RAB38P57729 211 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 SLAMF1Q13291 335 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 CHI3L2Q15782 390 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 DEPDC1Q5TB30 811 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 LIPJQ5W064 366 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 MAMDC2Q7Z304 686 aaPredicted RBP13.17□□□□□ -0.3
PKDCC-207ENST00000485578 KBTBD2Q8IY47 623 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 Q8NA96 180 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 RAB3IL1Q8TBN0 382 aa13.17□□□□□ -0.3
PKDCC-207ENST00000485578 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms