RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 STX4Q12846 297 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 HSDL2Q6YN16 418 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF793Q6ZN11 406 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 UBE3DQ7Z6J8 389 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 DAZLQ92904 295 aaKnown RBP17.85■□□□□ 0.45
COL27A1-205ENST00000485397 PTCD3Q96EY7 689 aaKnown RBP17.85■□□□□ 0.45
COL27A1-205ENST00000485397 KRT12Q99456 494 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 MCCC2Q9HCC0 563 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 CD274Q9NZQ7 290 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 PTBP2Q9UKA9 531 aaKnown RBP17.85■□□□□ 0.45
COL27A1-205ENST00000485397 SAR1BQ9Y6B6 198 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF407Q9C0G0 2248 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 NKX2-6A6NCS4 301 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 FAM90A27PA6NNH2 459 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 NPIPA2E9PIF3 369 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 NPIPA3F8WFD2 350 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 CCNT2O60583 730 aaKnown RBP17.84■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF354AO60765 605 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-205ENST00000485397 LDB3O75112 727 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 SH3BGRLO75368 114 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 TNNI3P19429 210 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 CAPN3P20807 821 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 HPDP32754 393 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-205ENST00000485397 ATP6V0D1P61421 351 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 TGM3Q08188 693 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 CBLBQ13191 982 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 RCN2Q14257 317 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 EFTUD2Q15029 972 aaKnown RBP eCLIP17.84■□□□□ 0.459e-8■■■■□ 22.1
COL27A1-205ENST00000485397 PDK4Q16654 411 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 CDKL4Q5MAI5 379 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 CCDC71Q8IV32 467 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-205ENST00000485397 MORN4Q8NDC4 146 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 OR14A16Q8NHC5 309 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 LILRB4Q8NHJ6 448 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 PYROXD1Q8WU10 500 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 ASB5Q8WWX0 329 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 RND1Q92730 232 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 EXT2Q93063 718 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 TSPAN17Q96FV3 270 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 SCYL1Q96KG9 808 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 MAPKAP1Q9BPZ7 522 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 TTTY12Q9BZ98 90 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 SAYSD1Q9NPB0 183 aa17.84■□□□□ 0.45
COL27A1-205ENST00000485397 NPDC1Q9NQX5 325 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-205ENST00000485397 C17orf105B2RV13 164 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 STMN1P16949 149 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 MSH2P43246 934 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 KCNC1P48547 511 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 NUP107P57740 925 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 RNF4P78317 190 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 IRF8Q02556 426 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 PMPCAQ10713 525 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 CHIT1Q13231 466 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 GXYLT1Q4G148 440 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 PAOXQ6QHF9 649 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 PDPRQ8NCN5 879 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 SLC2A12Q8TD20 617 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 ZNF473Q8WTR7 871 aaKnown RBP17.83■□□□□ 0.44
COL27A1-205ENST00000485397 CDKL2Q92772 493 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 KIAA1191Q96A73 305 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 KCNC2Q96PR1 638 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 GPR22Q99680 433 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 RBBP8Q99708 897 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 NAPGQ99747 312 aaPredicted RBP17.83■□□□□ 0.44
COL27A1-205ENST00000485397 MS4A8Q9BY19 250 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 ZDHHC11Q9H8X9 412 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 LYRM4Q9HD34 91 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 PRM3Q9NNZ6 103 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 TXNDC16Q9P2K2 825 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 LIPGQ9Y5X9 500 aa17.83■□□□□ 0.44
COL27A1-205ENST00000485397 AKAP9Q99996 3911 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 SYNDIG1LA6NDD5 238 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ACOT7O00154 380 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 TOXO94900 526 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 GLSO94925 669 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ETHE1O95571 254 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 IGFBP2P18065 325 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 CNR1P21554 472 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ATP5A1P25705 553 aaKnown RBP17.82■□□□□ 0.44
COL27A1-205ENST00000485397 CHRNB4P30926 498 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 PAFAH1B1P43034 410 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 TFF3Q07654 80 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ILF2Q12905 390 aaKnown RBP17.82■□□□□ 0.44
COL27A1-205ENST00000485397 LAPTM5Q13571 262 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 HIST2H2ACQ16777 129 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-205ENST00000485397 PAGE2BQ5JRK9 111 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 HIST2H2AA3Q6FI13 130 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 RTL4Q6ZR62 310 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 CDH24Q86UP0 819 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ACOT4Q8N9L9 421 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 OR5M9Q8NGP3 310 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ANKRD9Q96BM1 317 aaPredicted RBP17.82■□□□□ 0.44
COL27A1-205ENST00000485397 CPNE1Q99829 537 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 TBCDQ9BTW9 1192 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 CD244Q9BZW8 370 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 ROGDIQ9GZN7 287 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 DPH5Q9H2P9 285 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 PNPLA3Q9NST1 481 aa17.82■□□□□ 0.44
COL27A1-205ENST00000485397 RNF112Q9ULX5 631 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms