RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 OR10A4Q9H209 315 aa2.26□□□□□ -2.05
VPS50-216ENST00000484954 PNNQ9H307 717 aaKnown RBP2.26□□□□□ -2.05
VPS50-216ENST00000484954 NMUR1Q9HB89 426 aa2.26□□□□□ -2.05
VPS50-216ENST00000484954 SH3GLB2Q9NR46 395 aa2.26□□□□□ -2.05
VPS50-216ENST00000484954 RSPH14Q9UHP6 348 aa2.26□□□□□ -2.05
VPS50-216ENST00000484954 TMED7Q9Y3B3 224 aa2.26□□□□□ -2.05
VPS50-216ENST00000484954 ANKDD1BA6NHY2 528 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 FAM220BPB1ANY3 271 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
VPS50-216ENST00000484954 FOLH1Q04609 750 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 CEACAM7Q14002 265 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 ABRAXAS2Q15018 415 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 RSBN1Q5VWQ0 802 aaPredicted RBP2.25□□□□□ -2.05
VPS50-216ENST00000484954 SHEQ5VZ18 495 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 ZNF600Q6ZNG1 722 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 CCDC186Q7Z3E2 898 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 CACUL1Q86Y37 369 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 BSCL2Q96G97 398 aaPredicted RBP2.25□□□□□ -2.05
VPS50-216ENST00000484954 INPP5KQ9BT40 448 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 TMX4Q9H1E5 349 aaPredicted RBP2.25□□□□□ -2.05
VPS50-216ENST00000484954 SP140LQ9H930 580 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 PDFQ9HBH1 243 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 RCOR3Q9P2K3 495 aaPredicted RBP2.25□□□□□ -2.05
VPS50-216ENST00000484954 GMEB2Q9UKD1 530 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 GTF3C4Q9UKN8 822 aa2.25□□□□□ -2.05
VPS50-216ENST00000484954 FAM205AQ6ZU69 1335 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 BCLAF3A2AJT9 711 aaKnown RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 CCDC162PA2VCL2 907 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZSCAN5CA6NGD5 496 aaPredicted RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZNF487B1APH4 448 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 RHBDL1O75783 438 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 KRT3P12035 628 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 ACKR3P25106 362 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZNF41P51814 821 aaPredicted RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 HMGCS2P54868 508 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 FKBP1BP68106 108 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 LCP2Q13094 533 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 CRMP1Q14194 572 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZNF776Q68DI1 518 aaPredicted RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 REP15Q6BDI9 236 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 PM20D1Q6GTS8 502 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 TRAT1Q6PIZ9 186 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 TMEM64Q6YI46 380 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 NLRP14Q86W24 1093 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 C8orf46Q8TAG6 207 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 SEPT8Q92599 483 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 PHYHIPLQ96FC7 376 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 CCM2Q9BSQ5 444 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZBP1Q9H171 429 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 MINDY3Q9H8M7 445 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 UBE2TQ9NPD8 197 aaPredicted RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 ZNF275Q9NSD4 429 aaPredicted RBP2.24□□□□□ -2.05
VPS50-216ENST00000484954 MED17Q9NVC6 651 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 KIAA1217Q5T5P2 1943 aa2.24□□□□□ -2.05
VPS50-216ENST00000484954 E7ENQ6 273 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 NEDD8-MDP1E9PL57 170 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 LYNP07948 512 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 FHP07954 510 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 CCDC159P0C7I6 412 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 RPL34P49207 117 aaKnown RBP2.23□□□□□ -2.05
VPS50-216ENST00000484954 FHITP49789 147 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 CETN1Q12798 172 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 CDO1Q16878 200 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 C2orf83Q53S99 150 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 OLFML2AQ68BL7 652 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 ZNF730Q6ZMV8 503 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 SPATA21Q7Z572 469 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 PCGF5Q86SE9 256 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 SLC22A18ASQ8N1D0 253 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 ELMOD1Q8N336 334 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 CARNMT1Q8N4J0 409 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 TMEM99Q8N816 258 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 SGF29Q96ES7 293 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 SIPA1Q96FS4 1042 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 ZNF274Q96GC6 653 aaPredicted RBP2.23□□□□□ -2.05
VPS50-216ENST00000484954 CNDP2Q96KP4 475 aaKnown RBP2.23□□□□□ -2.05
VPS50-216ENST00000484954 ERGIC2Q96RQ1 377 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 TNMDQ9H2S6 317 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 ZNF665Q9H7R5 613 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 NT5DC2Q9H857 520 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 S100A14Q9HCY8 104 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 PLSCR3Q9NRY6 295 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 FAM212BQ9NTI7 297 aaPredicted RBP2.23□□□□□ -2.05
VPS50-216ENST00000484954 PDRG1Q9NUG6 133 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 CLEC4EQ9ULY5 219 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 ETV7Q9Y603 341 aa2.23□□□□□ -2.05
VPS50-216ENST00000484954 C2orf92A0A1B0GVN3 265 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 TSPY2A6NKD2 308 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 TMCO5BA8MYB1 307 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 H0Y9J4 135 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 HDAC3O15379 428 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 ST8SIA3O43173 380 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 SCO2O43819 266 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 ZFYP08048 801 aaPredicted RBP2.22□□□□□ -2.05
VPS50-216ENST00000484954 ATP6V1B1P15313 513 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 ALDH3B1P43353 468 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 BRCC3P46736 316 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 HLCSP50747 726 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 CAPZA1P52907 286 aa2.22□□□□□ -2.05
VPS50-216ENST00000484954 SLC17A1Q14916 467 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms