RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SERPING1P05155 500 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 SBK2P0C263 348 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 SP9P0CG40 484 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 PCP11498 1178 aaKnown RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 PRG2P13727 222 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 FERP16591 822 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 DESP17661 470 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 CLCN4P51793 760 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 CASP9P55211 416 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 UCP2P55851 309 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 EVCP57679 992 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 YBEYP58557 167 aaPredicted RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 GAMTQ14353 236 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 PPA1Q15181 289 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 ACKR1Q16570 336 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 PRAMEF8Q5VWM4 474 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 PRUNE1Q86TP1 453 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 CCDC60Q8IWA6 550 aaPredicted RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 AQP12AQ8IXF9 295 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 SFRP1Q8N474 314 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 OR10Q1Q8NGQ4 319 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 SLC13A3Q8WWT9 602 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 TAF4BQ92750 862 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 BTBD9Q96Q07 612 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 PRAM1Q96QH2 718 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 CDCA3Q99618 268 aaPredicted RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 FAM213AQ9BRX8 229 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 TMEM245Q9H330 911 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 JPT2Q9H910 190 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 RNF121Q9H920 327 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMC4-215ENST00000484799 HPF1Q9NWY4 346 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 SLC12A6Q9UHW9 1150 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 NOCTQ9UK39 431 aaKnown RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 CCPG1Q9ULG6 757 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 FOXA2Q9Y261 457 aaPredicted RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 VSIG4Q9Y279 399 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 RPH3AQ9Y2J0 694 aaPredicted RBP3.28□□□□□ -1.88
SMC4-215ENST00000484799 STYXL1Q9Y6J8 313 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 ZNF318Q5VUA4 2279 aa3.28□□□□□ -1.88
SMC4-215ENST00000484799 KIAA1217Q5T5P2 1943 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 A0A087X0K7 114 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 A0A0A6YYC8 382 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 TRBV5-5A0A0J9YX44 114 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 PRSS46E5RG02 174 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 I3L1I5 382 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 TRAFD1O14545 582 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 HSF2BPO75031 334 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 GRAP2O75791 330 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 LETM1O95202 739 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 ALPPP05187 535 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 ABHD2P08910 425 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 CCDC192P0DO97 292 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 ALPPL2P10696 532 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 FOLR2P14207 255 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 OR3A1P47881 315 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 GFPT1Q06210 699 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 SLC3A1Q07837 685 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 INAQ16352 499 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 FHL5Q5TD97 284 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 KLHL10Q6JEL2 608 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 NEK5Q6P3R8 708 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 TTC27Q6P3X3 843 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 CD164L2Q6UWJ8 174 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 C3P1Q6ZMU1 363 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 IL17RELQ6ZVW7 336 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 TMEM126BQ8IUX1 230 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 RCOR2Q8IZ40 523 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 ZNF444Q8N0Y2 327 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 GPC2Q8N158 579 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 BATF2Q8N1L9 274 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 TMEM99Q8N816 258 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 CNOT6LQ96LI5 555 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 RBM24Q9BX46 236 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 TEX13AQ9BXU3 409 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 RIMS4Q9H426 269 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 RAB9BQ9NP90 201 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 MRPL17Q9NRX2 175 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 HACD3Q9P035 362 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 IL36AQ9UHA7 158 aa3.27□□□□□ -1.89
SMC4-215ENST00000484799 ZNF107Q9UII5 783 aaPredicted RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 TRMT6Q9UJA5 497 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 PIN4Q9Y237 131 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 HBS1LQ9Y450 684 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 MYH14Q7Z406 1995 aaKnown RBP3.27□□□□□ -1.89
SMC4-215ENST00000484799 DHX29Q7Z478 1369 aaKnown RBP3.26□□□□□ -1.89
SMC4-215ENST00000484799 MAGEB16A2A368 324 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 C5orf51A6NDU8 294 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 NPIPB9F8W1W9 429 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 K7EQD1 137 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 M0R296 226 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 TXNL1O43396 289 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 SSX5O60225 188 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 NME6O75414 186 aaPredicted RBP3.26□□□□□ -1.89
SMC4-215ENST00000484799 STAM2O75886 525 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 BAG3O95817 575 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 GAS8O95995 478 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 YES1P07947 543 aa3.26□□□□□ -1.89
SMC4-215ENST00000484799 MMP10P09238 476 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms