RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZNF595Q8IYB9 648 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 L3MBTL4Q8NA19 623 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SRFBP1Q8NEF9 429 aaKnown RBP11.48□□□□□ -0.57
MSH5-216ENST00000484309 WDR20Q8TBZ3 569 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 NCLNQ969V3 563 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 RGMAQ96B86 450 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 MTBPQ96DY7 904 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SIGLEC12Q96PQ1 595 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TAAR6Q96RI8 345 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 ROGDIQ9GZN7 287 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 RNF32Q9H0A6 362 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 KLHL1Q9NR64 748 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 ABI3Q9P2A4 366 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TMCO1Q9UM00 188 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 PCDHGA11Q9Y5H2 935 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 UTP20O75691 2785 aaKnown RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 H0YIV9 168 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 UGDHO60701 494 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 PRAMEF2O60811 474 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 EEDO75530 441 aaKnown RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 PYGBP11216 843 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 TPP2P29144 1249 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 CD96P40200 585 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 PIK3CBP42338 1070 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 OC90Q02509 493 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 STX4Q12846 297 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ELOAQ14241 798 aaKnown RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 RCN2Q14257 317 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 OR1C1Q15619 314 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 SGO1Q5FBB7 561 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ZNF766Q5HY98 468 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ZNF468Q5VIY5 522 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 TTC19Q6DKK2 380 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 TIFABQ6ZNK6 161 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 OR4N5Q8IXE1 308 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 B3GNT7Q8NFL0 401 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 OR4F6Q8NGB9 312 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 SUN3Q8TAQ9 357 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ZNF483Q8TF39 744 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 MZB1Q8WU39 189 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 REPS1Q96D71 796 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 UTP23Q9BRU9 249 aaKnown RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 ALOXE3Q9BYJ1 711 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 DEFB126Q9BYW3 111 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 LYRM4Q9HD34 91 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ADAP2Q9NPF8 381 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 OLAHQ9NV23 265 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ADGRE2Q9UHX3 823 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 ZNF223Q9UK11 482 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 SPACA6W5XKT8 324 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 USP9YO00507 2555 aaPredicted RBP11.47□□□□□ -0.57
MSH5-216ENST00000484309 POLEQ07864 2286 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
MSH5-216ENST00000484309 A0A1W2PPM1 405 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 ARHGAP10A1A4S6 786 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 BLACEA4D250 179 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 FGF17O60258 216 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 PRKNO60260 465 aaPredicted RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 CTNSO60931 367 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 SCELO95171 688 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 GBAP04062 536 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 RNF224P0DH78 156 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 CLCN2P51788 898 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 C18orf63Q68DL7 685 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 SPINK14Q6IE38 97 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 MYO7BQ6PIF6 2116 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 C16orf47Q6ZP98 133 aaPredicted RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 MILR1Q7Z6M3 343 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 BCORP1Q8N888 145 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 ZNF321PQ8N8H1 164 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 APCDD1LQ8NCL9 501 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 MDS2Q8NDY4 140 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 EPS8L3Q8TE67 593 aaKnown RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 TRPC4APQ8TEL6 797 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 DOK4Q8TEW6 326 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 VMP1Q96GC9 406 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 BARD1Q99728 777 aaKnown RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 CCDC77Q9BR77 488 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 CENPKQ9BS16 269 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 NTMT1Q9BV86 223 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 ZNF717Q9BY31 904 aaPredicted RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 ANKZF1Q9H8Y5 726 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 LIN28AQ9H9Z2 209 aaKnown RBP11.46□□□□□ -0.57
MSH5-216ENST00000484309 TSC22D4Q9Y3Q8 395 aa11.46□□□□□ -0.57
MSH5-216ENST00000484309 GLOD5A6NK44 160 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 WASHC1A8K0Z3 465 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TMPRSS11DO60235 418 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 DLX3O60479 287 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 SUPT7LO94864 414 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 OR4F21O95013 312 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 RASAL1O95294 804 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TNNI3P19429 210 aa11.45□□□□□ -0.58
MSH5-216ENST00000484309 TAC1P20366 129 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms