RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SLC3A1Q07837 685 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 AP1B1Q10567 949 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NPRL3Q12980 569 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 MAPK11Q15759 364 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 PKN2Q16513 984 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 C3AR1Q16581 482 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 DNAJC21Q5F1R6 531 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 AP1ARQ63HQ0 302 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 TTC19Q6DKK2 380 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NEPROQ6NW34 567 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 TATDN1Q6P1N9 297 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ALKBH5Q6P6C2 394 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ABRAXAS1Q6UWZ7 409 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CATSPER4Q7RTX7 472 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ITIH5Q86UX2 942 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF410Q86VK4 478 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NLRP14Q86W24 1093 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 LRRC49Q8IUZ0 686 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 STHQ8IWL8 128 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 UNC45BQ8IWX7 931 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SIDT2Q8NBJ9 832 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 MSANTD4Q8NCY6 345 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZNRF1Q8ND25 227 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 OR52E1Q8NGJ3 308 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 OR5M9Q8NGP3 310 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 C8orf46Q8TAG6 207 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 KIAA1524Q8TCG1 905 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 BRSK1Q8TDC3 778 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 GPR148Q8TDV2 347 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 UBLCP1Q8WVY7 318 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ARHGAP45Q92619 1136 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 MRPL53Q96EL3 112 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CFAP36Q96G28 342 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF396Q96N95 335 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ERGIC2Q96RQ1 377 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 RHOXF2Q9BQY4 288 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 JPH2Q9BR39 696 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF577Q9BSK1 485 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SYT11Q9BT88 431 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CCDC28BQ9BUN5 200 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ABCG4Q9H172 646 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CUEDC2Q9H467 287 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 DPEP2Q9H4A9 486 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 RPAP3Q9H6T3 665 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 MED20Q9H944 212 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 RPF1Q9H9Y2 349 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SPHK2Q9NRA0 654 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 FAM212BQ9NTI7 297 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 INTS10Q9NVR2 710 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 QPCTLQ9NXS2 382 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 HOXC10Q9NYD6 342 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 TECRQ9NZ01 308 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 RABL2AQ9UBK7 228 aaPredicted RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 CLIP2Q9UDT6 1046 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 MAD2L2Q9UI95 211 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 TRMT6Q9UJA5 497 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 GMEB2Q9UKD1 530 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 FBXW2Q9UKT8 454 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 STX8Q9UNK0 236 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NCKAP1Q9Y2A7 1128 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 ETV7Q9Y603 341 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 SELENOKQ9Y6D0 94 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 DDX49Q9Y6V7 483 aaKnown RBP1.89□□□□□ -2.11
ITGB1-213ENST00000484088 DCAF1Q9Y4B6 1507 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 UMODL1Q5DID0 1318 aa1.89□□□□□ -2.11
ITGB1-213ENST00000484088 NPC1L1Q9UHC9 1359 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 LOC105371242A0A075B767 164 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 IGHV3OR16-10A0A075B7F0 116 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 TRIM64A6NGJ6 449 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 TRIM64BA6NI03 449 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 ZNF724A8MTY0 619 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 H0YC42 278 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 TLR4O00206 839 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 CASQ2O14958 399 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-213ENST00000484088 CHUKO15111 745 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 TNFSF12O43508 249 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 NEMFO60524 1076 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 KERAO60938 352 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 ERLIN1O75477 346 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 CSDE1O75534 798 aaKnown RBP1.88□□□□□ -2.11
ITGB1-213ENST00000484088 PRDM1O75626 825 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 RAD51DO75771 328 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 OR6B1O95007 311 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 NXPH2O95156 264 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 TXNDC12O95881 172 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 EPOP01588 193 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 CHRNGP07510 517 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 MMP10P09238 476 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 SKILP12757 684 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 RPS2P15880 293 aaKnown RBP1.88□□□□□ -2.11
ITGB1-213ENST00000484088 STMN1P16949 149 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 PRKACGP22612 351 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 SP100P23497 879 aaPredicted RBP1.88□□□□□ -2.11
ITGB1-213ENST00000484088 FCARP24071 287 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 PDHA2P29803 388 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 GPR183P32249 361 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 HSPA1LP34931 641 aa1.88□□□□□ -2.11
ITGB1-213ENST00000484088 ETV5P41161 510 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms