RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 ATG4BQ9Y4P1 393 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 SPACA6W5XKT8 324 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
HDAC1-208ENST00000482310 PCSK5Q92824 1860 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF195O14628 629 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 AKAP10O43572 662 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 SCELO95171 688 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 BMP10O95393 424 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 AIFM1O95831 613 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 HEXBP07686 556 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 FHP07954 510 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 IL3P08700 152 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TROVE2P10155 538 aaKnown RBP eCLIP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 NR2F6P10588 404 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 MAOAP21397 527 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TACR1P25103 407 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 OTX2P32243 289 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 LSP1P33241 339 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 IDH3AP50213 366 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 NME5P56597 212 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TAS2R50P59544 299 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 BTG2P78543 158 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 MC1RQ01726 317 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TNFRSF17Q02223 184 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 SLC13A2Q13183 592 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 C6orf136Q5SQH8 315 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TMEM198Q66K66 360 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 FAM180BQ6P0A1 224 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF517Q6ZMY9 492 aaPredicted RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 RNF165Q6ZSG1 346 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 ACAD11Q709F0 780 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 ZCCHC7Q8N3Z6 543 aaKnown RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 C16orf78Q8WTQ4 265 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 FKBP10Q96AY3 582 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TBC1D20Q96BZ9 403 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 CRB3Q9BUF7 120 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 NPLQ9BXD5 320 aaPredicted RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 BAIAP2L1Q9UHR4 511 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 MKL2Q9ULH7 1088 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 FARSAQ9Y285 508 aaKnown RBP12.47□□□□□ -0.41
HDAC1-208ENST00000482310 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 ASB4Q9Y574 426 aa12.47□□□□□ -0.41
HDAC1-208ENST00000482310 URB1O60287 2271 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 NUP214P35658 2090 aaPredicted RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 A0A1W2PR48 441 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 WASHC1A8K0Z3 465 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 E9PBE3 544 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 KLHL41O60662 606 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 LDB3O75112 727 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 PRKAR1AP10644 381 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 LBPP18428 481 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 SDC1P18827 310 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 PRPH2P23942 346 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 PTPN4P29074 926 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 EIF2S3P41091 472 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 BUD31P41223 144 aaPredicted RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 EFNA3P52797 238 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF763Q0D2J5 394 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 C2orf80Q0P641 193 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 IL10RAQ13651 578 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 KIAA0040Q15053 153 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 ATP1A1-AS1Q5TC04 95 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 NDUFAF5Q5TEU4 345 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 ANKRD26P1Q6NSI1 321 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 MRPL14Q6P1L8 145 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 OR4N5Q8IXE1 308 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 STARD8Q92502 1023 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 TSLPQ969D9 159 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 CHMP6Q96FZ7 201 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 EGLN2Q96KS0 407 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 RILPQ96NA2 401 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 SPSB2Q99619 263 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 CCT7Q99832 543 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 MESP1Q9BRJ9 268 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 VN1R1Q9GZP7 353 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 LYRM4Q9HD34 91 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 PRTFDC1Q9NRG1 225 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 KCMF1Q9P0J7 381 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 C3orf18Q9UK00 162 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 ADAM29Q9UKF5 820 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 TCFL5Q9UL49 500 aa12.46□□□□□ -0.41
HDAC1-208ENST00000482310 EIF3LQ9Y262 564 aaKnown RBP12.46□□□□□ -0.41
HDAC1-208ENST00000482310 A8MUA0 341 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 IDSB3KWA1 339 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 C21orf140B9A014 251 aa12.45□□□□□ -0.42
HDAC1-208ENST00000482310 CYR61O00622 381 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms