RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TIAF1O95411 115 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ZNF888P0CJ79 500 aaPredicted RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 RAP1GDS1P52306 607 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 PLA2G16P53816 162 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SEC24CP53992 1094 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ARSFP54793 590 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 RAB8AP61006 207 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 GABREP78334 506 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 MRPS15P82914 257 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 CD83Q01151 205 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 BTKQ06187 659 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TBL3Q12788 808 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 ADPRMQ3LIE5 342 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TMEM35AQ53FP2 167 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 GARNL3Q5VVW2 1013 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TRIM40Q6P9F5 258 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 RNF165Q6ZSG1 346 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 Q6ZSR9 355 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TTLL10Q6ZVT0 673 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ABHD13Q7L211 337 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 CADM3Q8N126 398 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SRFBP1Q8NEF9 429 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 OR2L5Q8NG80 312 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 PMEPA1Q969W9 287 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 RNF31Q96EP0 1072 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 C3orf30Q96M34 536 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 C17orf62Q9BQA9 187 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 MRPL1Q9BYD6 325 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 AICDAQ9GZX7 198 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 POLR1BQ9H9Y6 1135 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 CUTCQ9NTM9 273 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SIRT5Q9NXA8 310 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 B3GALT1Q9Y5Z6 326 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 USH1CQ9Y6N9 552 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 A0A0G2JN53 185 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 CFAP73A6NFT4 308 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 FAM47E-STBD1D6RA91 191 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 HAX1O00165 279 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TNFSF15O95150 251 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 NTRK1P04629 796 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ZNF3P17036 446 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 NAGAP17050 411 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 CFL1P23528 166 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 MAPK1P28482 360 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 EMP3P54852 163 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TGM3Q08188 693 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 MOGQ16653 247 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 VWA5B1Q5TIE3 1220 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 C6orf89Q6UWU4 347 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 NKAIN3Q8N8D7 197 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 OR2T11Q8NH01 316 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 UTP15Q8TED0 518 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 GAL3ST3Q96A11 431 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 RGMAQ96B86 450 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TUBGCP3Q96CW5 907 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ZPBPQ9BS86 351 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 TRIM55Q9BYV6 548 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 ULBP3Q9BZM4 244 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 RIC8BQ9NVN3 520 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 AHSPQ9NZD4 102 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 DHCR7Q9UBM7 475 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 NDOR1Q9UHB4 597 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SRPK3Q9UPE1 567 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 MRPS2Q9Y399 296 aaKnown RBP10.99□□□□□ -0.65
HPS4-212ENST00000481910 CCL27Q9Y4X3 112 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 PCDHGA8Q9Y5G5 932 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SLC22A7Q9Y694 548 aa10.99□□□□□ -0.65
HPS4-212ENST00000481910 SEC16AO15027 2179 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 GMNCA6NCL1 334 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 PLPP1O14494 284 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 SEC22BO75396 215 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 SERPINB7O75635 380 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 TGDSO95455 350 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 ALOX12P18054 663 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 IL1RNP18510 177 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 GSTT1P30711 240 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 EVI2BP34910 448 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 SNRPNP63162 240 aaKnown RBP10.98□□□□□ -0.65
HPS4-212ENST00000481910 BTN3A2P78410 334 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 FAM53BQ14153 422 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 HERC3Q15034 1050 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 NR6A1Q15406 480 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 AP5B1Q2VPB7 878 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 GALNTL6Q49A17 601 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 DEFB134Q4QY38 66 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 XKR7Q5GH72 579 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 YOD1Q5VVQ6 348 aaPredicted RBP10.98□□□□□ -0.65
HPS4-212ENST00000481910 ABHD17CQ6PCB6 329 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 ARHGEF39Q8N4T4 335 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 C10orf90Q96M02 699 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 KCNC2Q96PR1 638 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 TEFMQ96QE5 360 aaKnown RBP10.98□□□□□ -0.65
HPS4-212ENST00000481910 CIB1Q99828 191 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 DDA1Q9BW61 102 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 MEAF6Q9HAF1 191 aa10.98□□□□□ -0.65
HPS4-212ENST00000481910 ANKHQ9HCJ1 492 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms