RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 DSG2Q14126 1118 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 CEBPEQ15744 281 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 ISXQ2M1V0 245 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 TRMT5Q32P41 509 aaKnown RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 SPANXN4Q5MJ08 99 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 LRIF1Q5T3J3 769 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 REP15Q6BDI9 236 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 SLC48A1Q6P1K1 146 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 FOXR1Q6PIV2 292 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 CEACAM20Q6UY09 585 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 ASRGL1Q7L266 308 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 TMPRSS12Q86WS5 348 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 ZNF595Q8IYB9 648 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 CA13Q8N1Q1 262 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 KRTCAP2Q8N6L1 136 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 EFCAB3Q8N7B9 438 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 TRIML2Q8N7C3 387 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 BMPERQ8N8U9 685 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 FAM47BQ8NA70 645 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 GOT1L1Q8NHS2 421 aaPredicted RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 ZCCHC10Q8TBK6 192 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 KLHL29Q96CT2 875 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 SLC7A6OSQ96CW6 309 aaPredicted RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 CCDC115Q96NT0 180 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 OR6C1Q96RD1 312 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 MACROD1Q9BQ69 325 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 DDA1Q9BW61 102 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 ASPSCR1Q9BZE9 553 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 SLC7A5P2Q9GIP4 190 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 SPRTNQ9H040 489 aaPredicted RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 RPF2Q9H7B2 306 aaKnown RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 TOR4AQ9NXH8 423 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 SH3BP4Q9P0V3 963 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 PRPF19Q9UMS4 504 aaKnown RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 CORO2BQ9UQ03 480 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 MAP4K5Q9Y4K4 846 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 GPR179Q6PRD1 2367 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 COL27A1Q8IZC6 1860 aaPredicted RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 CCDC187A0A096LP49 1063 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 A0A096LPI6 279 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 A0A1W2PR48 441 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 EFCAB7A8K855 629 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 FBP2O00757 339 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 SLC30A4O14863 429 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TM4SF5O14894 197 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PDPK1O15530 556 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ZNF749O43361 778 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 GDF9O60383 454 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 SCN2BO60939 215 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 CPNE3O75131 537 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 AIFM1O95831 613 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MT-CO3P00414 261 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 GBAP04062 536 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 IL1RNP18510 177 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 NTSP30990 170 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MPIP34949 423 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 NUDT2P50583 147 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PDX1P52945 283 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 HNRNPH2P55795 449 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 HSD17B7P56937 341 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TXNL4AP83876 142 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 RUNX2Q13950 521 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 NFYCQ13952 458 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 KCNAB1Q14722 419 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PGS1Q32NB8 556 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TIGD2Q4W5G0 525 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ASCL5Q7RTU5 278 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PDSS2Q86YH6 399 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TICAM1Q8IUC6 712 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TMEM126BQ8IUX1 230 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 DSELQ8IZU8 1212 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 POU5F2Q8N7G0 328 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 RCBTB1Q8NDN9 531 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 RBM15BQ8NDT2 890 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 OR4K14Q8NGD5 310 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 OR8J3Q8NGG0 315 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 OR9A4Q8NGU2 314 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 CLHC1Q8NHS4 586 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 CDC26Q8NHZ8 85 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PSMA8Q8TAA3 256 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 DNAJB14Q8TBM8 379 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 OR5P2Q8WZ92 322 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 GTF2H4Q92759 462 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MOAP1Q96BY2 351 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 LRRC58Q96CX6 371 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 RCN3Q96D15 328 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MMABQ96EY8 250 aaPredicted RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 RAB3IPQ96QF0 476 aaPredicted RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 TAAR9Q96RI9 348 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MAPKAP1Q9BPZ7 522 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 PELOQ9BRX2 385 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 SORBS1Q9BX66 1292 aaKnown RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 RAD21L1Q9H4I0 556 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ZNF304Q9HCX3 659 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 MKKSQ9NPJ1 570 aaPredicted RBP9.6□□□□□ -0.87
USP39-215ENST00000481409 SLC35C2Q9NQQ7 365 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 C14orf105Q9NVL8 296 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 TAS2R1Q9NYW7 299 aa9.6□□□□□ -0.87
USP39-215ENST00000481409 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms