RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMEM64Q6YI46 380 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 CTAGE6Q86UF2 777 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ZDHHC17Q8IUH5 632 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 OR13C5Q8NGS8 318 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 GIPC3Q8TF64 312 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 P3H4Q92791 437 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SLC35C1Q96A29 364 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 AZIN2Q96A70 460 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 DEFB118Q96PH6 123 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SECISBP2Q96T21 854 aaKnown RBP4.78□□□□□ -1.64
COPA-203ENST00000481040 VIPAS39Q9H9C1 493 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 LRRC4Q9HBW1 653 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 SLC52A3Q9NQ40 469 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 TBC1D13Q9NVG8 400 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 LHX3Q9UBR4 397 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 FBXL4Q9UKA2 621 aa4.78□□□□□ -1.64
COPA-203ENST00000481040 ASPDHA6ND91 283 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 SRRM4A7MD48 611 aaKnown RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 A8MUI8 341 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ARPC1BO15143 372 aaKnown RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 MBD3O95983 291 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 GP9P14770 177 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CCNCP24863 283 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 PTPN6P29350 595 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CCKBRP32239 447 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ACADSBP45954 432 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 DNA2P51530 1060 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 LIMK2P53671 638 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 MYL7Q01449 175 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 TNFRSF17Q02223 184 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 GBE1Q04446 702 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 HSPA14Q0VDF9 509 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ZBTB17Q13105 803 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 OR1C1Q15619 314 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 TRIP10Q15642 601 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CCDC57Q2TAC2 916 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 LRRC37A5PQ49AS3 106 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 KCTD21Q4G0X4 260 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 SIRPB2Q5JXA9 342 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ASPHD2Q6ICH7 369 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CDC42EP5Q6NZY7 148 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 PMF1Q6P1K2 205 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 NIPAL3Q6P499 406 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 TRIM65Q6PJ69 517 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 SLC24A5Q71RS6 500 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 TRMT11Q7Z4G4 463 aaKnown RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 SLC22A16Q86VW1 577 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 FAM131BQ86XD5 332 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 NRACQ8N912 160 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CCDC197Q8NCU1 140 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 LNX1Q8TBB1 728 aaPredicted RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 CD99L2Q8TCZ2 262 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 RLN3Q8WXF3 142 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 IGSF21Q96ID5 467 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 RAB40CQ96S21 281 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 TBCDQ9BTW9 1192 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ALG12Q9BV10 488 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 GCOM2Q9BZD3 368 aaPredicted RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 IL25Q9H293 177 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 EGLN3Q9H6Z9 239 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 GAREM1Q9H706 876 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 CALHM2Q9HA72 323 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ZBTB20Q9HC78 741 aaPredicted RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 ZNF319Q9P2F9 582 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 P2RX2Q9UBL9 471 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 EPHA6Q9UF33 1036 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 C19orf25Q9UFG5 118 aaPredicted RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 MAN1B1Q9UKM7 699 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 ZNF490Q9ULM2 529 aaPredicted RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 DIMT1Q9UNQ2 313 aaKnown RBP4.77□□□□□ -1.65
COPA-203ENST00000481040 SPACA6W5XKT8 324 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 PTCH1Q13635 1447 aa4.77□□□□□ -1.65
COPA-203ENST00000481040 YJEFN3A6XGL0 299 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 PROB1E7EW31 1015 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 KRT86O43790 486 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 EML2O95834 649 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 IGHV4-39P01824 125 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 FGF5P12034 268 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 CALB2P22676 271 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 AXLP30530 894 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 TTC3P53804 2025 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 NUCB2P80303 420 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 SSBP2P81877 361 aaPredicted RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 CNTN2Q02246 1040 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 GAGE5Q13069 117 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 GAGE6Q13070 117 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 GRB14Q14449 540 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 KRT81Q14533 505 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 MEF2DQ14814 521 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 EZH2Q15910 746 aaKnown RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 EXT1Q16394 746 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 ZSWIM7Q19AV6 140 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 POM121L1PQ3SYA9 428 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 PDLIM3Q53GG5 364 aaPredicted RBP4.76□□□□□ -1.65
COPA-203ENST00000481040 SLC25A53Q5H9E4 307 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 PLPP4Q5VZY2 271 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 TCEAL6Q6IPX3 200 aa4.76□□□□□ -1.65
COPA-203ENST00000481040 CBLN3Q6UW01 205 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms