RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 EFTUD2Q15029 972 aaKnown RBP eCLIP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 ZKSCAN8Q15776 578 aaPredicted RBP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 IL20RBQ6UXL0 311 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 HSDL2Q6YN16 418 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CMC1Q7Z7K0 106 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CD163Q86VB7 1156 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 SPATA4Q8NEY3 305 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 FAM57AQ8TBR7 257 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PHF10Q8WUB8 498 aaKnown RBP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 KIAA1191Q96A73 305 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 SDCCAG3Q96C92 435 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 WDR34Q96EX3 536 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 KCNC2Q96PR1 638 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 VKORC1Q9BQB6 163 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 ALOXE3Q9BYJ1 711 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CD244Q9BZW8 370 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 OR8D2Q9GZM6 311 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PRDM7Q9NQW5 492 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 GRHL1Q9NZI5 618 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PTBP2Q9UKA9 531 aaKnown RBP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CSMD1Q96PZ7 3565 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 SAP18O00422 153 aaKnown RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 LDB3O75112 727 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 OR6B1O95007 311 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 GSTA2P09210 222 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 EPORP19235 508 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 ELAVL4P26378 380 aaKnown RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 SOX3P41225 446 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 PLTPP55058 493 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 PLGLB1Q02325 96 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 ID2Q02363 134 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 KBTBD12Q3ZCT8 623 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 CMPK2Q5EBM0 449 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 GRTP1Q5TC63 336 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF793Q6ZN11 406 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 LRRC70Q7Z2Q7 622 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 TBC1D1Q86TI0 1168 aaPredicted RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 ZFP62Q8NB50 900 aaPredicted RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 PSD4Q8NDX1 1056 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 SRFBP1Q8NEF9 429 aaKnown RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 OR14A16Q8NHC5 309 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 STAG3L4Q8TBR4 150 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 DAZLQ92904 295 aaKnown RBP14.17□□□□□ -0.14
LIMS3-203ENST00000480744 UBXN10Q96LJ8 280 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 DMRTA2Q96SC8 542 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 MAPKAP1Q9BPZ7 522 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 MS4A8Q9BY19 250 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 ROGDIQ9GZN7 287 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 DEFB127Q9H1M4 99 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 NUDT4Q9NZJ9 180 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 SPACA6W5XKT8 324 aa14.17□□□□□ -0.14
LIMS3-203ENST00000480744 FBN2P35556 2912 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 PHF3Q92576 2039 aaKnown RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 SYNDIG1LA6NDD5 238 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 TMEM200CA6NKL6 621 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 FAM166BA8MTA8 275 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 C17orf105B2RV13 164 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 G3V3Y1 287 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 UBXN8O00124 270 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 ADAM10O14672 748 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 TGFB1P01137 390 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 ATP5A1P25705 553 aaKnown RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 SSR2P43308 183 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 DLG1Q12959 904 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 DDX39BQ13838 428 aaKnown RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 TBCCQ15814 346 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 AP5B1Q2VPB7 878 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 MED27Q6P2C8 311 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 UBE3DQ7Z6J8 389 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 GPALPP1Q8IXQ4 340 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF321PQ8N8H1 164 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 ACOT4Q8N9L9 421 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 MORN4Q8NDC4 146 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 OR52N2Q8NGI0 321 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 C16orf52Q8NHV5 167 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF473Q8WTR7 871 aaKnown RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 CA5BP1Q8WTZ4 195 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 PTPMT1Q8WUK0 201 aaPredicted RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 UBE2E3Q969T4 207 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 LURAP1Q96LR2 239 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 RASL10BQ96S79 203 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 TBCDQ9BTW9 1192 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 TRIM8Q9BZR9 551 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 PHACTR1Q9C0D0 580 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 NMRAL1Q9HBL8 299 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 LYRM4Q9HD34 91 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 DEPPQ9NTK1 212 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 COQ3Q9NZJ6 369 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 MYOTQ9UBF9 498 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 OPTCQ9UBM4 332 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 VTI1BQ9UEU0 232 aa14.16□□□□□ -0.14
LIMS3-203ENST00000480744 UTP11Q9Y3A2 253 aaKnown RBP14.16□□□□□ -0.14
LIMS3-203ENST00000480744 A0A0G2JMM0 328 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 A0A1W2PPB8 328 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 A0A1W2PRS3 328 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 PINLYPA6NC86 204 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 KIR3DP1A8MWS1 328 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 ACOT7O00154 380 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 C1QAP02745 245 aa14.15□□□□□ -0.14
LIMS3-203ENST00000480744 SLC35E2BP0CK96 405 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms