RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 PRDM7Q9NQW5 492 aa14.33□□□□□ -0.12
CDK9-203ENST00000480353 MS4A12Q9NXJ0 267 aa14.33□□□□□ -0.12
CDK9-203ENST00000480353 ERVK-11Q9UQG0 969 aa14.33□□□□□ -0.12
CDK9-203ENST00000480353 UGDHO60701 494 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 ZFAND5O76080 213 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 MTHFD2P13995 350 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 HIST1H1TP22492 207 aaPredicted RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 PIK3CBP42338 1070 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 SSR4P51571 173 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 HNRNPFP52597 415 aaKnown RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 SRSF11Q05519 484 aaKnown RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 SLAMF1Q13291 335 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDK9-203ENST00000480353 ZNF324BQ6AW86 544 aaPredicted RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 OR4C11Q6IEV9 310 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 PTGR2Q8N8N7 351 aaPredicted RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 TMEM52Q8NDY8 209 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 NFAM1Q8NET5 270 aaPredicted RBP14.32□□□□□ -0.12
CDK9-203ENST00000480353 OR14A16Q8NHC5 309 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 HUS1BQ8NHY5 278 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 SCMH1Q96GD3 660 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 MAPKAP1Q9BPZ7 522 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 COPS7AQ9UBW8 275 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 PHF11Q9UIL8 331 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 SH3BGRL2Q9UJC5 107 aa14.32□□□□□ -0.12
CDK9-203ENST00000480353 MYOCOSA0A1B0GUC4 107 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 HMX2A2RU54 273 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 TRIM49D1C9J1S8 452 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 KLRC4-KLRK1H3BQV0 150 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 CYR61O00622 381 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 LDB3O75112 727 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 ITGA10O75578 1167 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 CLDN9O95484 217 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 STSP08842 583 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 RNF224P0DH78 156 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 COL6A2P12110 1019 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 PTX3P26022 381 aaPredicted RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 PPP2R1BP30154 601 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 BUD31P41223 144 aaPredicted RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 HLCSP50747 726 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 TDGF1P3P51864 188 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 RPS13P62277 151 aaKnown RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 PCBP2Q15366 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDK9-203ENST00000480353 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.31□□□□□ -0.12
CDK9-203ENST00000480353 TECRLQ5HYJ1 363 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 TEX35Q5T0J7 233 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 DEPDC1Q5TB30 811 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 METTL2BQ6P1Q9 378 aaKnown RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 CYP20A1Q6UW02 462 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 CYP4Z2PQ8N1L4 340 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 ASB15Q8WXK1 588 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 DGAT2Q96PD7 388 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 FUT8Q9BYC5 575 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 OR8D2Q9GZM6 311 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 NOL11Q9H8H0 719 aaKnown RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 WDR41Q9HAD4 459 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 DMRT3Q9NQL9 472 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 NFU1Q9UMS0 254 aa14.31□□□□□ -0.12
CDK9-203ENST00000480353 KLF13Q9Y2Y9 288 aaPredicted RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 SPTBN1Q01082 2364 aaKnown RBP14.31□□□□□ -0.12
CDK9-203ENST00000480353 DIDO1Q9BTC0 2240 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 LRRC14BA6NHZ5 514 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 A8MVJ9 347 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 NPIPA5E9PKD4 350 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 NEURL1O76050 574 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 SIX3O95343 332 aaPredicted RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 TBX6O95947 436 aaPredicted RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 SNRPAP09012 282 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 ESRRAP11474 423 aaPredicted RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 ZNF24P17028 368 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 MST1P26927 711 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 ID2Q02363 134 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 PCDH1Q08174 1060 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 IFT88Q13099 833 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 E2F2Q14209 437 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 KRTCAP3Q53RY4 240 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 UBAP2Q5T6F2 1119 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 MTFR2Q6P444 385 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 HSDL2Q6YN16 418 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 ZNF793Q6ZN11 406 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 UBE3DQ7Z6J8 389 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 GPR180Q86V85 440 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 PLD6Q8N2A8 252 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 APCDD1LQ8NCL9 501 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 MORN4Q8NDC4 146 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 RBM18Q96H35 190 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 TSPAN10Q9H1Z9 355 aaPredicted RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 HPF1Q9NWY4 346 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 VTI1BQ9UEU0 232 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 ZNF180Q9UJW8 692 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 NPIPA1Q9UND3 350 aa14.3□□□□□ -0.12
CDK9-203ENST00000480353 YARS2Q9Y2Z4 477 aaKnown RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 USP9XQ93008 2570 aaPredicted RBP14.3□□□□□ -0.12
CDK9-203ENST00000480353 ARHGAP10A1A4S6 786 aa14.29□□□□□ -0.12
CDK9-203ENST00000480353 H0YIV9 168 aa14.29□□□□□ -0.12
CDK9-203ENST00000480353 CCL21O00585 134 aa14.29□□□□□ -0.12
CDK9-203ENST00000480353 KLK8O60259 260 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms