RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TRIM31Q9BZY9 425 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 KCNF1Q9H3M0 494 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 DNAJC11Q9NVH1 559 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 HPF1Q9NWY4 346 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 NSMCE4AQ9NXX6 385 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 NINQ8N4C6 2090 aa15.5■□□□□ 0.07
TRIM13-208ENST00000478111 CXorf49A8MYA2 514 aaPredicted RBP15.49■□□□□ 0.07
TRIM13-208ENST00000478111 CD1DP15813 335 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 CHRNB4P30926 498 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 RPL21P46778 160 aaKnown RBP15.49■□□□□ 0.07
TRIM13-208ENST00000478111 KCNC1P48547 511 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 HSPA7P48741 367 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 PPIAP62937 165 aaKnown RBP15.49■□□□□ 0.07
TRIM13-208ENST00000478111 POU4F1Q01851 419 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 BMPR2Q13873 1038 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 E2F2Q14209 437 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF750Q32MQ0 723 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 CDKL4Q5MAI5 379 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 HSDL2Q6YN16 418 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF793Q6ZN11 406 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 CDH24Q86UP0 819 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 TCAIMQ8N3R3 496 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 ASB15Q8WXK1 588 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 PTCD3Q96EY7 689 aaKnown RBP15.49■□□□□ 0.07
TRIM13-208ENST00000478111 RUNDC3BQ96NL0 473 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 TTTY12Q9BZ98 90 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 PTBP2Q9UKA9 531 aaKnown RBP15.49■□□□□ 0.07
TRIM13-208ENST00000478111 CLCA3PQ9Y6N3 262 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 ARHGAP21Q5T5U3 1957 aa15.49■□□□□ 0.07
TRIM13-208ENST00000478111 SYNDIG1LA6NDD5 238 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 USP27XA6NNY8 438 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 FAM166BA8MTA8 275 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 G3V3Y1 287 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 CLGNO14967 610 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 PHGDHO43175 533 aaKnown RBP15.48■□□□□ 0.07
TRIM13-208ENST00000478111 LDB3O75112 727 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 STK16O75716 305 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 C1QAP02745 245 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 IFNA16P05015 189 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 CCDC166P0CW27 439 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 NUP107P57740 925 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 RNF4P78317 190 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 PMPCAQ10713 525 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 EFTUD2Q15029 972 aaKnown RBP eCLIP15.48■□□□□ 0.074e-14■■■■□ 22
TRIM13-208ENST00000478111 GXYLT1Q4G148 440 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 SULT1C3Q6IMI6 304 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 SPNS3Q6ZMD2 512 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 GPSM1Q86YR5 675 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 CCDC71Q8IV32 467 aaPredicted RBP15.48■□□□□ 0.07
TRIM13-208ENST00000478111 ZBED8Q8IZ13 594 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 OR14A16Q8NHC5 309 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 RND1Q92730 232 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 DAZLQ92904 295 aaKnown RBP15.48■□□□□ 0.07
TRIM13-208ENST00000478111 SCYL1Q96KG9 808 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 MAPKAP1Q9BPZ7 522 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 CNOT10Q9H9A5 744 aaKnown RBP15.48■□□□□ 0.07
TRIM13-208ENST00000478111 LYRM4Q9HD34 91 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 PNPLA3Q9NST1 481 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 WWOXQ9NZC7 414 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 SNX24Q9Y343 169 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 LIPGQ9Y5X9 500 aa15.48■□□□□ 0.07
TRIM13-208ENST00000478111 ANKHD1Q8IWZ3 2542 aaKnown RBP15.48■□□□□ 0.07
TRIM13-208ENST00000478111 EFCAB8A8MWE9 144 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 NPIPA2E9PIF3 369 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 NPIPA3F8WFD2 350 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 RTCAO00442 366 aaKnown RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 ETHE1O95571 254 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 IGHG3P01860 377 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 CNR1P21554 472 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 ATP5A1P25705 553 aaKnown RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 MSX1P28360 303 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 SSTR1P30872 391 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 HPDP32754 393 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 GMPRP36959 345 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 CASP2P42575 452 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 SLC12A2P55011 1212 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 FOXO1Q12778 655 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 STX4Q12846 297 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 TBCCQ15814 346 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 PDK4Q16654 411 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 PAOXQ6QHF9 649 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 RGS9BPQ6ZS82 235 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 CAPN12Q6ZSI9 719 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 DMRTC2Q8IXT2 367 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 PDPRQ8NCN5 879 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 OR8K3Q8NH51 312 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 SLC2A12Q8TD20 617 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 ZNF473Q8WTR7 871 aaKnown RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 KIAA1191Q96A73 305 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 ANKRD9Q96BM1 317 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 UBXN10Q96LJ8 280 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 KCNC2Q96PR1 638 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 EFCAB11Q9BUY7 163 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 MS4A8Q9BY19 250 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 OR8D2Q9GZM6 311 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 COPS7BQ9H9Q2 264 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-208ENST00000478111 VPS13CQ709C8 3753 aa15.47■□□□□ 0.07
TRIM13-208ENST00000478111 A0A1B0GVC2 190 aa15.46■□□□□ 0.07
TRIM13-208ENST00000478111 FAM90A27PA6NNH2 459 aa15.46■□□□□ 0.07
TRIM13-208ENST00000478111 C17orf105B2RV13 164 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms