RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SERPINI1Q99574 410 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 BARD1Q99728 777 aaKnown RBP9.56□□□□□ -0.88
CCM2-208ENST00000476594 NTMT1Q9BV86 223 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 ELOVL6Q9H5J4 265 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 CDCP1Q9H5V8 836 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 NOL11Q9H8H0 719 aaKnown RBP9.56□□□□□ -0.88
CCM2-208ENST00000476594 DMRT3Q9NQL9 472 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 NECTIN3Q9NQS3 549 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 PRDM7Q9NQW5 492 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCM2-208ENST00000476594 LRFN1Q9P244 771 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 FBXW2Q9UKT8 454 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 PPT2Q9UMR5 302 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 SNX6Q9UNH7 406 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 SLC5A6Q9Y289 635 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 ASB1Q9Y576 335 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 SHANK1Q9Y566 2161 aa9.56□□□□□ -0.88
CCM2-208ENST00000476594 SPENQ96T58 3664 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 PTPN13Q12923 2485 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 TRBV11-1A0A0K0K1C0 115 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CLEC18AA5D8T8 446 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 FAM227AF5H4B4 570 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 PRAMEF4O60810 478 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 GUCY1B2O75343 617 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 ZFAND5O76080 213 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 SEMA3DO95025 777 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 F10P00742 488 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 GSTA1P08263 222 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 GMPRP36959 345 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CASP6P55212 293 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 NAA20P61599 178 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 PLIN5Q00G26 463 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 TUBA3CQ13748 450 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 ZRSR2Q15696 482 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 EIF2S3LQ2VIR3 472 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 GGTA1PQ4G0N0 100 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 C6orf163Q5TEZ5 329 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 PRAMEF9Q5VWM5 478 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 FCRLBQ6BAA4 426 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 TUBA3EQ6PEY2 450 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CLEC18BQ6UXF7 455 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 MILR1Q7Z6M3 343 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 GPR180Q86V85 440 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 SLC22A9Q8IVM8 553 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 GPALPP1Q8IXQ4 340 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 TMEM156Q8N614 296 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CLEC18CQ8NCF0 446 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 MORN4Q8NDC4 146 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 MYRIPQ8NFW9 859 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 OR5L2Q8NGL0 311 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 NR4A3Q92570 626 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 TANKQ92844 425 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CCDC126Q96EE4 140 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 RBM18Q96H35 190 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 DGAT2Q96PD7 388 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 MTERF1Q99551 399 aaKnown RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 SLX1AQ9BQ83 275 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 ALOXE3Q9BYJ1 711 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 AICDAQ9GZX7 198 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 OR51B5Q9H339 312 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 KLF13Q9Y2Y9 288 aaPredicted RBP9.55□□□□□ -0.88
CCM2-208ENST00000476594 MAST4O15021 2626 aa9.55□□□□□ -0.88
CCM2-208ENST00000476594 CPAMD8Q8IZJ3 1885 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 A0A1B0GUH1 482 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 CYR61O00622 381 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 DNAJB6O75190 326 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SLC25A12O75746 678 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SIX3O95343 332 aaPredicted RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 TBX6O95947 436 aaPredicted RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 HLCSP50747 726 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SSR4P51571 173 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 MLF1P58340 268 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 RPS13P62277 151 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 TNFRSF17Q02223 184 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SLAMF1Q13291 335 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SLC29A2Q14542 456 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 FRG2Q64ET8 278 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 ADNP2Q6IQ32 1131 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SLC25A25Q6KCM7 469 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 MTFR2Q6P444 385 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 GFRALQ6UXV0 394 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 HSDL2Q6YN16 418 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 CLNKQ7Z7G1 428 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 HOMEZQ8IX15 550 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 PLD6Q8N2A8 252 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 POGLUT1Q8NBL1 392 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 APCDD1LQ8NCL9 501 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 UBLCP1Q8WVY7 318 aaPredicted RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 NCLNQ969V3 563 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 FRG2BQ96QU4 278 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 CSF3RQ99062 836 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 MAPKAP1Q9BPZ7 522 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 RPF2Q9H7B2 306 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 SEMA4BQ9NPR2 832 aaPredicted RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 ZNF358Q9NW07 568 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 SUCOQ9UBS9 1254 aaKnown RBP9.54□□□□□ -0.88
CCM2-208ENST00000476594 VTI1BQ9UEU0 232 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 DCDC2Q9UHG0 476 aa9.54□□□□□ -0.88
CCM2-208ENST00000476594 MID2Q9UJV3 735 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms