RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 PIK3CBP42338 1070 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 ELAVL1Q15717 326 aaKnown RBP30.02■■■□□ 2.4
CHKB-207ENST00000476289 AP5B1Q2VPB7 878 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 C1QL3Q5VWW1 255 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 PTGR2Q8N8N7 351 aaPredicted RBP30.02■■■□□ 2.4
CHKB-207ENST00000476289 TMEM178AQ8NBL3 297 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 TRIM45Q9H8W5 580 aaPredicted RBP30.02■■■□□ 2.4
CHKB-207ENST00000476289 IPPKQ9H8X2 491 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 XPR1Q9UBH6 696 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 SEC14L3Q9UDX4 400 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 ADGRE2Q9UHX3 823 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 NFU1Q9UMS0 254 aa30.02■■■□□ 2.4
CHKB-207ENST00000476289 LDB3O75112 727 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 SLC25A12O75746 678 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 TRHRP34981 398 aaPredicted RBP30.01■■■□□ 2.39
CHKB-207ENST00000476289 CYB561P49447 251 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 SLC25A25Q6KCM7 469 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 TAOK1Q7L7X3 1001 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 HORMAD2Q8N7B1 307 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 FRMD6Q96NE9 622 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 ALOXE3Q9BYJ1 711 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 ZNF180Q9UJW8 692 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 FBXW2Q9UKT8 454 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 RNF11Q9Y3C5 154 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 TSC22D4Q9Y3Q8 395 aa30.01■■■□□ 2.39
CHKB-207ENST00000476289 TNPO3Q9Y5L0 923 aaKnown RBP30.01■■■□□ 2.39
CHKB-207ENST00000476289 A0A087WUV0 522 aaPredicted RBP30■■■□□ 2.39
CHKB-207ENST00000476289 ASPDHA6ND91 283 aa30■■■□□ 2.39
CHKB-207ENST00000476289 TRIM49D1C9J1S8 452 aa30■■■□□ 2.39
CHKB-207ENST00000476289 H0YIV9 168 aa30■■■□□ 2.39
CHKB-207ENST00000476289 CDK2AP1O14519 115 aa30■■■□□ 2.39
CHKB-207ENST00000476289 PRKNO60260 465 aaPredicted RBP30■■■□□ 2.39
CHKB-207ENST00000476289 KRT38O76015 456 aa30■■■□□ 2.39
CHKB-207ENST00000476289 IFNA16P05015 189 aa30■■■□□ 2.39
CHKB-207ENST00000476289 HLCSP50747 726 aa30■■■□□ 2.39
CHKB-207ENST00000476289 RPS13P62277 151 aaKnown RBP30■■■□□ 2.39
CHKB-207ENST00000476289 ID2Q02363 134 aa30■■■□□ 2.39
CHKB-207ENST00000476289 OR4C11Q6IEV9 310 aa30■■■□□ 2.39
CHKB-207ENST00000476289 MAMDC2Q7Z304 686 aaPredicted RBP30■■■□□ 2.39
CHKB-207ENST00000476289 PHF21BQ96EK2 531 aa30■■■□□ 2.39
CHKB-207ENST00000476289 PCDHGA11Q9Y5H2 935 aa30■■■□□ 2.39
CHKB-207ENST00000476289 PLPP1O14494 284 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 FCHO1O14526 889 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 UGDHO60701 494 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 RAP1GDS1P52306 607 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 STX4Q12846 297 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 CPSF6Q16630 551 aaKnown RBP eCLIP29.99■■■□□ 2.39
CHKB-207ENST00000476289 MAPKAPK3Q16644 382 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 METTL2BQ6P1Q9 378 aaKnown RBP29.99■■■□□ 2.39
CHKB-207ENST00000476289 PNPLA5Q7Z6Z6 429 aaPredicted RBP29.99■■■□□ 2.39
CHKB-207ENST00000476289 FJX1Q86VR8 437 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 CEP112Q8N8E3 955 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 L3MBTL4Q8NA19 623 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 PTPMT1Q8WUK0 201 aaPredicted RBP29.99■■■□□ 2.39
CHKB-207ENST00000476289 SCYL1Q96KG9 808 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 TSPAN10Q9H1Z9 355 aaPredicted RBP29.99■■■□□ 2.39
CHKB-207ENST00000476289 VTI1BQ9UEU0 232 aa29.99■■■□□ 2.39
CHKB-207ENST00000476289 OR7A17O14581 309 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 NME2P1O60361 137 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 RBP1P09455 135 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 NME2P22392 152 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 CNTFP26441 200 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 PIK3CGP48736 1102 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 C16orf47Q6ZP98 133 aaPredicted RBP29.98■■■□□ 2.39
CHKB-207ENST00000476289 TMEM132CQ8N3T6 1108 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 OR52B6Q8NGF0 335 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 RGMAQ96B86 450 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 ANKRD9Q96BM1 317 aaPredicted RBP29.98■■■□□ 2.39
CHKB-207ENST00000476289 CDK15Q96Q40 435 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 ZNF717Q9BY31 904 aaPredicted RBP29.98■■■□□ 2.39
CHKB-207ENST00000476289 NOL11Q9H8H0 719 aaKnown RBP29.98■■■□□ 2.39
CHKB-207ENST00000476289 CLCA3PQ9Y6N3 262 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 SPACA6W5XKT8 324 aa29.98■■■□□ 2.39
CHKB-207ENST00000476289 CENPEQ02224 2701 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 SYNDIG1LA6NDD5 238 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 TMEM200CA6NKL6 621 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 ITGA10O75578 1167 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 CPN2P22792 545 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 COL8A1P27658 744 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 SLAMF1Q13291 335 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 ZRSR2Q15696 482 aaKnown RBP29.97■■■□□ 2.39
CHKB-207ENST00000476289 TSNAXIP1Q2TAA8 658 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 WDR20Q8TBZ3 569 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 SREK1Q8WXA9 508 aaKnown RBP29.97■■■□□ 2.39
CHKB-207ENST00000476289 NSUN5Q96P11 429 aaKnown RBP29.97■■■□□ 2.39
CHKB-207ENST00000476289 CCDC77Q9BR77 488 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 LIN28AQ9H9Z2 209 aaKnown RBP29.97■■■□□ 2.39
CHKB-207ENST00000476289 PCTPQ9UKL6 214 aa29.97■■■□□ 2.39
CHKB-207ENST00000476289 A0A1B0GUH1 482 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 EXOC1LA0A1B0GW35 172 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 ZG16O60844 167 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 ETHE1O95571 254 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 COL6A2P12110 1019 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 GCAP28676 217 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 NEK2P51955 445 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 HNRNPH2P55795 449 aaKnown RBP29.96■■■□□ 2.39
CHKB-207ENST00000476289 PER3P56645 1201 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 ALDH6A1Q02252 535 aaKnown RBP29.96■■■□□ 2.39
CHKB-207ENST00000476289 ZNF321PQ8N8H1 164 aa29.96■■■□□ 2.39
CHKB-207ENST00000476289 OR14A16Q8NHC5 309 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms