RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NMRK1Q9NWW6 199 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 ADGRE2Q9UHX3 823 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 G3BP2Q9UN86 482 aaKnown RBP14.78□□□□□ -0.04
CPSF3-203ENST00000475482 CAPN7Q9Y6W3 813 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 MAU2Q9Y6X3 613 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 ESPL1Q14674 2120 aa14.78□□□□□ -0.04
CPSF3-203ENST00000475482 A6NL46 340 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 H7BY64 318 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 TXNDC9O14530 226 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 FFAR3O14843 346 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 HAT1O14929 419 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 GPR42O15529 346 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 FOXS1O43638 330 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 DPM1O60762 260 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 UBOX5O94941 541 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 EIF2S1P05198 315 aaKnown RBP14.77□□□□□ -0.05
CPSF3-203ENST00000475482 SERPINB1P30740 379 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 ATP4BP51164 291 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 MLLT10P55197 1068 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 BNIP1Q12981 228 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 CSTF3Q12996 717 aaKnown RBP14.77□□□□□ -0.05
CPSF3-203ENST00000475482 SQLEQ14534 574 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 NR6A1Q15406 480 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 GSTA3Q16772 222 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 HKDC1Q2TB90 917 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 GALNTL6Q49A17 601 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 CHSY3Q70JA7 882 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.05
CPSF3-203ENST00000475482 METTL27Q8N6F8 245 aaPredicted RBP14.77□□□□□ -0.05
CPSF3-203ENST00000475482 Q8NA96 180 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 CLEC1AQ8NC01 280 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 STT3BQ8TCJ2 826 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 CMTM5Q96DZ9 223 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 PRAP1Q96NZ9 151 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 AIF1LQ9BQI0 150 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 PRM3Q9NNZ6 103 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 ATP13A2Q9NQ11 1180 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 COL12A1Q99715 3063 aa14.77□□□□□ -0.05
CPSF3-203ENST00000475482 ATP6AP2A0A1C7CYW4 349 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 A0A1W2PQ72 361 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 MASP2O00187 686 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 P2RX6O15547 441 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 ATP6AP2O75787 350 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 ZGLP1P0C6A0 271 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 IDO1P14902 403 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 PRDX6P30041 224 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 GRK3P35626 688 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 CCR8P51685 355 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 ERVK-8P63133 956 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 CSNK1G2P78368 415 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 AIMP2Q13155 320 aaKnown RBP14.76□□□□□ -0.05
CPSF3-203ENST00000475482 DSG2Q14126 1118 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 FAM53BQ14153 422 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 ABRAXAS2Q15018 415 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 RPS6KA2Q15349 733 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 MAPRE2Q15555 327 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 JMJD6Q6NYC1 403 aaPredicted RBP14.76□□□□□ -0.05
CPSF3-203ENST00000475482 VN1R4Q7Z5H5 301 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 FAM9CQ8IZT9 166 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 AMER3Q8N944 861 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 COL26A1Q96A83 441 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 PNPLA2Q96AD5 504 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 NSL1Q96IY1 281 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 METTL2AQ96IZ6 378 aaKnown RBP14.76□□□□□ -0.05
CPSF3-203ENST00000475482 C3orf30Q96M34 536 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 CCDC106Q9BWC9 280 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 TGIF2Q9GZN2 237 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 SOX17Q9H6I2 414 aaPredicted RBP14.76□□□□□ -0.05
CPSF3-203ENST00000475482 BRF2Q9HAW0 419 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 ZNF282Q9UDV7 671 aaPredicted RBP14.76□□□□□ -0.05
CPSF3-203ENST00000475482 FBXL4Q9UKA2 621 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 CDC14AQ9UNH5 594 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 SH2B3Q9UQQ2 575 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 TSC22D4Q9Y3Q8 395 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 MAP4K5Q9Y4K4 846 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 HIVEP3Q5T1R4 2406 aa14.76□□□□□ -0.05
CPSF3-203ENST00000475482 SCN3AQ9NY46 2000 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 RSL1D1O76021 490 aaKnown RBP14.75□□□□□ -0.05
CPSF3-203ENST00000475482 PRR35P0CG20 571 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 ESRRAP11474 423 aaPredicted RBP14.75□□□□□ -0.05
CPSF3-203ENST00000475482 CALB2P22676 271 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 MAPK1P28482 360 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 SNRPNP63162 240 aaKnown RBP14.75□□□□□ -0.05
CPSF3-203ENST00000475482 OCA2Q04671 838 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 KLC1Q07866 573 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 SGO1Q5FBB7 561 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 SLC6A19Q695T7 634 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 PLD3Q8IV08 490 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 LAS2Q8IYD9 372 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 FNDC5Q8NAU1 212 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 ABHD11Q8NFV4 315 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 OR11G2Q8NGC1 345 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 RERGQ96A58 199 aaPredicted RBP14.75□□□□□ -0.05
CPSF3-203ENST00000475482 MIEF2Q96C03 454 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 TM4SF19Q96DZ7 209 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 THAP11Q96EK4 314 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 SARGQ9BW04 601 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 NT5DC2Q9H857 520 aa14.75□□□□□ -0.05
CPSF3-203ENST00000475482 TMEM45AQ9NWC5 275 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms