RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CLDN9O95484 217 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 TPP2P29144 1249 aaPredicted RBP21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 ARL1P40616 181 aaPredicted RBP21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 TDGF1P3P51864 188 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 ARFIP1P53367 373 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 MLF1P58340 268 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 RPS13P62277 151 aaKnown RBP21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 OC90Q02509 493 aaPredicted RBP21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 ELAVL1Q15717 326 aaKnown RBP21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 TIFABQ6ZNK6 161 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 ARMC10Q8N2F6 343 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 HORMAD2Q8N7B1 307 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 ATP6V1E2Q96A05 226 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 VMP1Q96GC9 406 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 TXLNGYQ9BZA5 131 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 FBXW2Q9UKT8 454 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 SLC5A6Q9Y289 635 aa21.05■□□□□ 0.96
PTP4A1-203ENST00000473334 SVILO95425 2214 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 PLPP1O14494 284 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 FCHO1O14526 889 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 OR7A17O14581 309 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 DDAH2O95865 285 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 IFNA16P05015 189 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 CD46P15529 392 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 CPN2P22792 545 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 PTX3P26022 381 aaPredicted RBP21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 CCNG1P51959 295 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 STX4Q12846 297 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 SLAMF1Q13291 335 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 ZRSR2Q15696 482 aaKnown RBP21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 SPINK14Q6IE38 97 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 TMEM132CQ8N3T6 1108 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 TMEM178AQ8NBL3 297 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 LRRN4CLQ8ND94 238 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 WDR20Q8TBZ3 569 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 NCLNQ969V3 563 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 SCMH1Q96GD3 660 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 C5orf34Q96MH7 638 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 SORBS1Q9BX66 1292 aaKnown RBP21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 LRFN1Q9P244 771 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 ERRFI1Q9UJM3 462 aaPredicted RBP21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 ZGRF1Q86YA3 2104 aa21.04■□□□□ 0.96
PTP4A1-203ENST00000473334 NEURL1O76050 574 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 RNF224P0DH78 156 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 PMP22Q01453 160 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 SERTAD2Q14140 314 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 SLC29A2Q14542 456 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 ZCCHC7Q8N3Z6 543 aaKnown RBP21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 OR52B6Q8NGF0 335 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 NSUN5Q96P11 429 aaKnown RBP21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 CDK15Q96Q40 435 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 CCDC77Q9BR77 488 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 NTMT1Q9BV86 223 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 HES7Q9BYE0 225 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 ALOXE3Q9BYJ1 711 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 ZBTB26Q9HCK0 441 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 KLHL1Q9NR64 748 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 MS4A12Q9NXJ0 267 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 PSD3Q9NYI0 1048 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 VTI1BQ9UEU0 232 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 FETUBQ9UGM5 382 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 PHF11Q9UIL8 331 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 ZNF223Q9UK11 482 aaPredicted RBP21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 CLCA3PQ9Y6N3 262 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 POLEQ07864 2286 aa21.03■□□□□ 0.96
PTP4A1-203ENST00000473334 FOXE1O00358 373 aaPredicted RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 LDB3O75112 727 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 RPS17P08708 135 aaKnown RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 GP1BBP13224 206 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 TRHRP34981 398 aaPredicted RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 GPR143P51810 404 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 CUL3Q13618 768 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 ZNF468Q5VIY5 522 aaPredicted RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 GSPT2Q8IYD1 628 aaKnown RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 C7orf57Q8NEG2 295 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 OR14A16Q8NHC5 309 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 DAZLQ92904 295 aaKnown RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 TRIM45Q9H8W5 580 aaPredicted RBP21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 PPT2Q9UMR5 302 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 OSGIN2Q9Y236 505 aa21.02■□□□□ 0.96
PTP4A1-203ENST00000473334 UTP20O75691 2785 aaKnown RBP21.02■□□□□ 0.95
PTP4A1-203ENST00000473334 IQANK1A0A1B0GTG1 560 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 MYOCOSA0A1B0GUC4 107 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 A8MT66 165 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 SP1P08047 785 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 SBK3P0C264 359 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 CYB561P49447 251 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 NEK2P51955 445 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 TRAF3Q13114 568 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 SLC25A25Q6KCM7 469 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 GPR180Q86V85 440 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 LCA5Q86VQ0 697 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 CNPY4Q8N129 248 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 TMEM151AQ8N4L1 468 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 EIF1ADQ8N9N8 165 aaKnown RBP21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 MORN4Q8NDC4 146 aa21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 THAP3Q8WTV1 239 aaPredicted RBP21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 ANKRD9Q96BM1 317 aaPredicted RBP21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 ZNF717Q9BY31 904 aaPredicted RBP21.01■□□□□ 0.95
PTP4A1-203ENST00000473334 EPB41L4BQ9H329 900 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms