RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TPOP07202 933 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 CSF3P09919 207 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 G6PDP11413 515 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 HMGA1P17096 107 aaKnown RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 TYMPP19971 482 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 HLA-FP30511 346 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 HMGCLP35914 325 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 MAPK8P45983 427 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 CLDN20P56880 219 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 SIM1P81133 766 aaPredicted RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 GRK1Q15835 563 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 RBBP7Q16576 425 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 HKDC1Q2TB90 917 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 SLC39A12Q504Y0 691 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 USP39Q53GS9 565 aaKnown RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 FAM219BQ5XKK7 198 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 OR4F3Q6IEY1 312 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TYW3Q6IPR3 259 aaKnown RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 FAM131AQ6UXB0 335 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 HSDL2Q6YN16 418 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 Q6ZSR9 355 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 PDZD3Q86UT5 571 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 COMMD7Q86VX2 200 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 ATCAYQ86WG3 371 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TRIM48Q8IWZ4 208 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 RYBPQ8N488 228 aaPredicted RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 ZNF557Q8N988 423 aaPredicted RBP9.67□□□□□ -0.86
APTX-216ENST00000472896 LPCAT1Q8NF37 534 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 RLN3Q8WXF3 142 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TESCQ96BS2 214 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 MRGPRX2Q96LB1 330 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 SENP8Q96LD8 212 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TBCDQ9BTW9 1192 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TMEM168Q9H0V1 697 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 ACTL8Q9H568 366 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 REEP1Q9H902 201 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 TDP1Q9NUW8 608 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 SEC14L4Q9UDX3 406 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 PCTPQ9UKL6 214 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 COMMD10Q9Y6G5 202 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 AP1M2Q9Y6Q5 423 aa9.67□□□□□ -0.86
APTX-216ENST00000472896 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SH3D21A4FU49 640 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 MYO1GB0I1T2 1018 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SCO1O75880 301 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 PTHP01270 115 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 IFNA7P01567 189 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 PGRP06401 933 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 STSP08842 583 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 HOXD4P09016 255 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 PRKAR1AP10644 381 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ICAM2P13598 275 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 OGNP20774 298 aaKnown RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 PTX3P26022 381 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 HTR7P34969 479 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 DGKQP52824 942 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ITGA1P56199 1179 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 LILRA4P59901 499 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SMARCB1Q12824 385 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 FAM214AQ32MH5 1076 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 TTLL9Q3SXZ7 439 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SYPL2Q5VXT5 272 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SAXO2Q658L1 398 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ERICH5Q6P6B1 374 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 RNF165Q6ZSG1 346 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 LINC00518Q8N0U6 118 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 RBFAQ8N0V3 343 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ATPAF2Q8N5M1 289 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 ZNF680Q8NEM1 530 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 TSTD1Q8NFU3 115 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 OR7G3Q8NG95 312 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 AKAP1Q92667 903 aaKnown RBP eCLIP9.66□□□□□ -0.86
APTX-216ENST00000472896 BBC3Q96PG8 261 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 MGLLQ99685 303 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 BARD1Q99728 777 aaKnown RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 CPPED1Q9BRF8 314 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 TAPBPLQ9BX59 468 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 PRRG3Q9BZD7 231 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 LINC00597Q9H2U6 94 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ATP13A1Q9HD20 1204 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 RBFOX1Q9NWB1 397 aaKnown RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 ASIC5Q9NY37 505 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 EVLQ9UI08 416 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 MBD1Q9UIS9 605 aaPredicted RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 SAMHD1Q9Y3Z3 626 aaKnown RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 NME7Q9Y5B8 376 aa9.66□□□□□ -0.86
APTX-216ENST00000472896 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
APTX-216ENST00000472896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.65□□□□□ -0.86
APTX-216ENST00000472896 SLC12A8A0AV02 714 aa9.65□□□□□ -0.86
APTX-216ENST00000472896 UBA6A0AVT1 1052 aaPredicted RBP9.65□□□□□ -0.86
APTX-216ENST00000472896 ZNF670-ZNF695F2Z2N8 137 aa9.65□□□□□ -0.86
APTX-216ENST00000472896 K7EQS6 105 aa9.65□□□□□ -0.86
APTX-216ENST00000472896 RAF1P04049 648 aa9.65□□□□□ -0.86
APTX-216ENST00000472896 HMBSP08397 361 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms