RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 NHEJ1Q9H9Q4 299 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-209ENST00000472147 KLHL42Q9P2K6 505 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 B4GALT7Q9UBV7 327 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 ZNF629Q9UEG4 869 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-209ENST00000472147 GPR160Q9UJ42 338 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 PLEKHA6Q9Y2H5 1048 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
ITGB1-209ENST00000472147 HYOU1Q9Y4L1 999 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 NFS1Q9Y697 457 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 RTTNQ86VV8 2226 aa5.41□□□□□ -1.54
ITGB1-209ENST00000472147 FN1P02751 2386 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 OR2W5A6NFC9 320 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 OR51F1A6NGY5 319 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 NPIPA2E9PIF3 369 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 NPIPA3F8WFD2 350 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GFYI3L273 518 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SGK494L7N484 410 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CES2O00748 559 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CDC40O60508 579 aaKnown RBP eCLIP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 ZFAND5O76080 213 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 LY6G6DO95868 133 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 MBD3O95983 291 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 IGHG3P01860 377 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CATP04040 527 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 TUBB4AP04350 444 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PRKCAP17252 672 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CHRM3P20309 590 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CNR1P21554 472 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 JAK1P23458 1154 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GRK3P35626 688 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CLCN2P51788 898 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CORO7P57737 925 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PPIAP62937 165 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 NKX6-1P78426 367 aaPredicted RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 LAPTM5Q13571 262 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 TRIM14Q14142 442 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GBX1Q14549 363 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 RPS6KA1Q15418 735 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SF3B4Q15427 424 aaKnown RBP eCLIP5.4□□□□□ -1.543e-10■□□□□ 10.3
ITGB1-209ENST00000472147 KCNMB1Q16558 191 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 HYAL4Q2M3T9 481 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 FBXL19-AS1Q494R0 122 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CCDC38Q502W7 563 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PCID2Q5JVF3 399 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CATSPEREQ5SY80 951 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 RIPPLY2Q5TAB7 128 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 TMEM198Q66K66 360 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 ZNF585AQ6P3V2 769 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 KIF18BQ86Y91 864 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 LIX1LQ8IVB5 337 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 KRT222Q8N1A0 295 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 AFAP1L2Q8N4X5 818 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GPATCH11Q8N954 259 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 FAM71DQ8N9W8 422 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 NFAM1Q8NET5 270 aaPredicted RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 WFDC11Q8NEX6 87 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SGCZQ96LD1 299 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GBP4Q96PP9 640 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SECISBP2Q96T21 854 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PKP4Q99569 1192 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CHP1Q99653 195 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SMR3AQ99954 134 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 GPATCH1Q9BRR8 931 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 LANCL2Q9NS86 450 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 CATSPERZQ9NTU4 200 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 BEX4Q9NWD9 120 aaPredicted RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PCYOX1Q9UHG3 505 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 ACAD8Q9UKU7 415 aa5.4□□□□□ -1.54
ITGB1-209ENST00000472147 PPIEQ9UNP9 301 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 DRG1Q9Y295 367 aaKnown RBP5.4□□□□□ -1.54
ITGB1-209ENST00000472147 SCN2AQ99250 2005 aa5.4□□□□□ -1.55
ITGB1-209ENST00000472147 TRBV23-1A0A0A0MS06 115 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 A0A0G2JNJ9 132 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 SYNDIG1LA6NDD5 238 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 TUBAL3A6NHL2 446 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 GOLGA6L19H0YKK7 550 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 ACOT7O00154 380 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 AQP7O14520 342 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 CHST10O43529 356 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 NRP2O60462 931 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 HCN1O60741 890 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 GLSO94925 669 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-209ENST00000472147 SLC16A8O95907 504 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 FHP07954 510 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 TPM1P09493 284 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 CTNNA1P35221 906 aaKnown RBP5.39□□□□□ -1.55
ITGB1-209ENST00000472147 MAGEA1P43355 309 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 NPY2RP49146 381 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 RWDD2BP57060 319 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 TERF2Q15554 542 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 FLYWCH1Q4VC44 716 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 WLSQ5T9L3 541 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 THEMIS2Q5TEJ8 643 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 CAPN13Q6MZZ7 669 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-209ENST00000472147 MRNIPQ6NTE8 343 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 C11orf63Q6NUN7 778 aa5.39□□□□□ -1.55
ITGB1-209ENST00000472147 PAMR1Q6UXH9 720 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms