RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CTAGE3PQ8IX95 158 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 PLD6Q8N2A8 252 aaKnown RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 ZNF808Q8N4W9 903 aaPredicted RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 ACOT4Q8N9L9 421 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 OR2L5Q8NG80 312 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 KCTD4Q8WVF5 259 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 ANKRD7Q92527 254 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 KIAA1191Q96A73 305 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 WDR34Q96EX3 536 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 FAR2Q96K12 515 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 GPR78Q96P69 363 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 MS4A8Q9BY19 250 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 FAM129AQ9BZQ8 928 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 CD244Q9BZW8 370 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 OR8D2Q9GZM6 311 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 NT5DC2Q9H857 520 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 WHRNQ9P202 907 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 DAPP1Q9UN19 280 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 ATG4BQ9Y4P1 393 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
USP48-207ENST00000471752 ACANP16112 2415 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 NCOA6Q14686 2063 aaPredicted RBP7.5□□□□□ -1.21
USP48-207ENST00000471752 DNAJC13O75165 2243 aa7.5□□□□□ -1.21
USP48-207ENST00000471752 NKX2-6A6NCS4 301 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 PABPN1LA6NDY0 278 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 ANKDD1BA6NHY2 528 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 GLOD5A6NK44 160 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 B3GALT2O43825 422 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CDC40O60508 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
USP48-207ENST00000471752 CTNSO60931 367 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 SIX3O95343 332 aaPredicted RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 GBAP04062 536 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CLPSP04118 112 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 IFNA16P05015 189 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RFPL3SP0C7P2 107 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 ESRRAP11474 423 aaPredicted RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 PCNAP12004 261 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 STMN1P16949 149 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 PIGAP37287 484 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CASP2P42575 452 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 PAFAH1B1P43034 410 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 DNASE1L1P49184 302 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 HNMTP50135 292 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CLCN2P51788 898 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 HK2P52789 917 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 HNRNPH2P55795 449 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 HSD17B7P56937 341 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RAB10P61026 200 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 STXBP1P61764 594 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 IRF8Q02556 426 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 DDX39BQ13838 428 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 PDK4Q16654 411 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 KRTCAP3Q53RY4 240 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 MROH9Q5TGP6 573 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RTL6Q6ICC9 239 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 SULT1C3Q6IMI6 304 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 SYT10Q6XYQ8 523 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 CD163Q86VB7 1156 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 SLC34A3Q8N130 599 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CYP4Z2PQ8N1L4 340 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 TBC1D19Q8N5T2 526 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 TEX9Q8N6V9 391 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 TMEM178AQ8NBL3 297 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 PDPRQ8NCN5 879 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 OR7G3Q8NG95 312 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 OR5M9Q8NGP3 310 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 ZNF721Q8TF20 911 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 MTFMTQ96DP5 389 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 SCYL1Q96KG9 808 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 LURAP1Q96LR2 239 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CDK15Q96Q40 435 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RASL10BQ96S79 203 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 MTERF1Q99551 399 aaKnown RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 CPNE1Q99829 537 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 LRRC1Q9BTT6 524 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 CNPPD1Q9BV87 410 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 ZNF717Q9BY31 904 aaPredicted RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 POPDC3Q9HBV1 291 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 PROK2Q9HC23 129 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 ZDHHC18Q9NUE0 388 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 VTI1BQ9UEU0 232 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RNF112Q9ULX5 631 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 RNF11Q9Y3C5 154 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 MMACHCQ9Y4U1 282 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 KLF2Q9Y5W3 355 aaPredicted RBP7.49□□□□□ -1.21
USP48-207ENST00000471752 CACNA1CQ13936 2221 aa7.49□□□□□ -1.21
USP48-207ENST00000471752 A0A1W2PR48 441 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 C17orf105B2RV13 164 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 SUPT3HB4E1H0 165 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 PGRMC2O15173 223 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 TMPRSS11DO60235 418 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 NME6O75414 186 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 SUPT3HO75486 399 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 ZFAND5O76080 213 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 CLDN14O95500 239 aa7.48□□□□□ -1.21
USP48-207ENST00000471752 NADKO95544 446 aaPredicted RBP7.48□□□□□ -1.21
USP48-207ENST00000471752 C2P06681 752 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms