RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PHLDB2Q86SQ0 1253 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 TBC1D10CQ8IV04 446 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PRR22Q8IZ63 422 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ELMOD1Q8N336 334 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 NME8Q8N427 588 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF781Q8N8C0 355 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CLEC1AQ8NC01 280 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 OCC1Q8TAD7 63 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 C8orf46Q8TAG6 207 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 GPR148Q8TDV2 347 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PCNPQ8WW12 178 aaKnown RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 RIT1Q92963 219 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 SLC35C1Q96A29 364 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PHYHIPLQ96FC7 376 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 SIGLEC12Q96PQ1 595 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 INPP5KQ9BT40 448 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 DEFB126Q9BYW3 111 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 TRIM7Q9C029 511 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZBP1Q9H171 429 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 MTIF3Q9H2K0 278 aaKnown RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PDFQ9HBH1 243 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 SH3GLB2Q9NR46 395 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF275Q9NSD4 429 aaPredicted RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PDRG1Q9NUG6 133 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 MED17Q9NVC6 651 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 CLIC5Q9NZA1 410 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 Q9UF83 564 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 HBS1LQ9Y450 684 aaKnown RBP1.01□□□□□ -2.25
UBXN4-207ENST00000471246 PCDHGA1Q9Y5H4 931 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 KIAA1217Q5T5P2 1943 aa1.01□□□□□ -2.25
UBXN4-207ENST00000471246 FAM205AQ6ZU69 1335 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CFAP65Q6ZU64 1925 aaKnown RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 OR5H15A6NDH6 313 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 C5orf52A6NGY3 159 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TSPY2A6NKD2 308 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 E7ENQ6 273 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 E2F3O00716 465 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 MCF2LO15068 1137 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 SCO2O43819 266 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CLN5O75503 358 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 GBAP04062 536 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 LYNP07948 512 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 VIMP08670 466 aaKnown RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 FAM58BPP0C7Q3 252 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 SKILP12757 684 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ACKR3P25106 362 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TIA1P31483 386 aaKnown RBP eCLIP1□□□□□ -2.25
UBXN4-207ENST00000471246 KRT20P35900 424 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ID1P41134 155 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 PRKCIP41743 596 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ALDH3B1P43353 468 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TNFRSF4P43489 277 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 BRCC3P46736 316 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF41P51814 821 aaPredicted RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 NAGLUP54802 743 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 HMGCS2P54868 508 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 FOLH1Q04609 750 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CETN1Q12798 172 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 EIF4EBP2Q13542 120 aaPredicted RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 CEACAM7Q14002 265 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ABRAXAS2Q15018 415 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 RALBP1Q15311 655 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TTC31Q49AM3 519 aaPredicted RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 C1orf141Q5JVX7 400 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 LIPJQ5W064 366 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF600Q6ZNG1 722 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 PCGF5Q86SE9 256 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 NLRP14Q86W24 1093 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CACUL1Q86Y37 369 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC71Q8IV32 467 aaPredicted RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 TIGD4Q8IY51 512 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 SLC22A18ASQ8N1D0 253 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF525Q8N782 197 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TMEM99Q8N816 258 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 LSMEM1Q8N8F7 131 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 SAMD12Q8N8I0 201 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF491Q8N8L2 437 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 RNF149Q8NC42 400 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CCDC191Q8NCU4 936 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 BEST4Q8NFU0 473 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 SAP25Q8TEE9 199 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ESAMQ96AP7 390 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 NUS1Q96E22 293 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ZBED6CLQ96FA7 236 aaPredicted RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 CNDP2Q96KP4 475 aaKnown RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 INTS14Q96SY0 518 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 PRMT1Q99873 361 aaKnown RBP1□□□□□ -2.25
UBXN4-207ENST00000471246 MAPKAP1Q9BPZ7 522 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CCM2Q9BSQ5 444 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 OR10A4Q9H209 315 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1□□□□□ -2.25
UBXN4-207ENST00000471246 ZNF446Q9NWS9 450 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 NKIRAS2Q9NYR9 191 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 IL17CQ9P0M4 197 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ANAPC5Q9UJX4 755 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 GMEB2Q9UKD1 530 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 CLEC4EQ9ULY5 219 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 PLEKHA6Q9Y2H5 1048 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 TMED7Q9Y3B3 224 aa1□□□□□ -2.25
UBXN4-207ENST00000471246 ETV7Q9Y603 341 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms