RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PCDHB18PQ96TA0 734 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 ZNF577Q9BSK1 485 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 PAPOLGQ9BWT3 736 aaKnown RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TNMDQ9H2S6 317 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 UBQLN3Q9H347 655 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 DPEP2Q9H4A9 486 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 PDRG1Q9NUG6 133 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 ANO10Q9NW15 660 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TMOD3Q9NYL9 352 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 NOCTQ9UK39 431 aaKnown RBP3.16□□□□□ -1.9
BRCA2-202ENST00000470094 SATB2Q9UPW6 733 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 TEX264Q9Y6I9 313 aa3.16□□□□□ -1.9
BRCA2-202ENST00000470094 ABCC9O60706 1549 aa3.15□□□□□ -1.9
BRCA2-202ENST00000470094 A0A0B4J203 849 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 ILVBLA1L0T0 632 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 C5orf51A6NDU8 294 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 SERINC4A6NH21 518 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 SHISA9B4DS77 424 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 H0YIG0 161 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 CRCPO75575 148 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 ADORA3P0DMS8 318 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 SELEP16581 610 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 GAP43P17677 238 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 IL10P22301 178 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 IL4RP24394 825 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 FEN1P39748 380 aaKnown RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 CD86P42081 329 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 LIMK2P53671 638 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 BTG1P62324 171 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 ARHGAP1Q07960 439 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 GCKRQ14397 625 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 LRRC37A5PQ49AS3 106 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 SLC25A30Q5SVS4 291 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 DND1Q8IYX4 353 aaKnown RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 UBLCP1Q8WVY7 318 aaPredicted RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 ABCG8Q9H221 673 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 JPT2Q9H910 190 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 RAB9BQ9NP90 201 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 COMMD8Q9NX08 183 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 DBF4Q9UBU7 674 aaPredicted RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 FETUBQ9UGM5 382 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 MRPS18CQ9Y3D5 142 aaKnown RBP3.15□□□□□ -1.91
BRCA2-202ENST00000470094 SPATA31D1Q6ZQQ2 1576 aa3.15□□□□□ -1.91
BRCA2-202ENST00000470094 HCFC1P51610 2035 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 FAM149AA5PLN7 773 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KRT87PA6NCN2 255 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CCDC69A6NI79 296 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 SLC9B1P1A6NJY1 282 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 PDHXO00330 501 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 OGTO15294 1046 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 INPP4BO15327 924 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 SIGLEC5O15389 551 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 TNFSF12O43508 249 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ATP9AO75110 1047 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 RAD51DO75771 328 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 STAM2O75886 525 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ABHD2P08910 425 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CALRP27797 417 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 MAGEB1P43366 347 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 OR3A1P47881 315 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ZFP36L2P47974 494 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 SERPINH1P50454 418 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ATP4BP51164 291 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CASP9P55211 416 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 UCP2P55851 309 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 SRPXP78539 464 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 AKAP17AQ02040 695 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 PEX6Q13608 980 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 MLF2Q15773 248 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 LRRC38Q5VT99 294 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KCTD11Q693B1 232 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 TCEAL6Q6IPX3 200 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF770Q6IQ21 691 aaPredicted RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KLHL10Q6JEL2 608 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 Q6ZVQ6 151 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CATSPER4Q7RTX7 472 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 PRSS42Q7Z5A4 293 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 SERPINA12Q8IW75 414 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KIAA0895Q8NCT3 520 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CKAP2Q8WWK9 683 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 TBC1D31Q96DN5 1066 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 EEF2KMTQ96G04 330 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 CDKN2AIPNLQ96HQ2 116 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 RASL10BQ96S79 203 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF559Q9BR84 538 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 UBAC1Q9BSL1 405 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 XPO4Q9C0E2 1151 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 C5orf66Q9H5L9 145 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KCNK13Q9HB14 408 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 GPR173Q9NS66 373 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 MAD2L2Q9UI95 211 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 TRMT6Q9UJA5 497 aaKnown RBP3.14□□□□□ -1.91
BRCA2-202ENST00000470094 GMEB2Q9UKD1 530 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 PILRAQ9UKJ1 303 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 TP53TG3Q9ULZ0 132 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 KCNK6Q9Y257 313 aa3.14□□□□□ -1.91
BRCA2-202ENST00000470094 MTF2Q9Y483 593 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms