RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 C17orf62Q9BQA9 187 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 NDC1Q9BTX1 674 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 LRTM1Q9HBL6 345 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 SLC6A20Q9NP91 592 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 ASF1BQ9NVP2 202 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 AIG1Q9NVV5 245 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 P4HTMQ9NXG6 502 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 OR6C2Q9NZP2 312 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 TAGLN3Q9UI15 199 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 PLCL2Q9UPR0 1127 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 PCDHGA11Q9Y5H2 935 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 MYO9AB2RTY4 2548 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 PCSK5Q92824 1860 aa12.89□□□□□ -0.35
LINC00173-201ENST00000470091 IGKV1-8A0A0C4DH67 115 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 H3BMH7 237 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 SLC22A2O15244 555 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 ESRRAP11474 423 aaPredicted RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 CCR8P51685 355 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 DIO3P55073 304 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 CSTF3Q12996 717 aaKnown RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 HIST2H2ACQ16777 129 aaPredicted RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 AP5B1Q2VPB7 878 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 DCAF10Q5QP82 559 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 HIST2H2AA3Q6FI13 130 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 ADCK2Q7Z695 626 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 MCATQ8IVS2 390 aaKnown RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 LAS2Q8IYD9 372 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 KRT78Q8N1N4 520 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 ABHD11Q8NFV4 315 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 OR2L3Q8NG85 312 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 OR2Y1Q8NGV0 311 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 HUS1BQ8NHY5 278 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 REPS1Q96D71 796 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 IP6K3Q96PC2 410 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 ZBTB20Q9HC78 741 aaPredicted RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 MRPS30Q9NP92 439 aaKnown RBP12.88□□□□□ -0.35
LINC00173-201ENST00000470091 DMRT3Q9NQL9 472 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 C5AR2Q9P296 337 aa12.88□□□□□ -0.35
LINC00173-201ENST00000470091 CACNA1DQ01668 2161 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 SERTM1A2A2V5 107 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 MAGEB17A8MXT2 336 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 H7BY64 318 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PSMD12O00232 456 aaPredicted RBP12.87□□□□□ -0.35
LINC00173-201ENST00000470091 NRP2O60462 931 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 SH3BGRLO75368 114 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 ALPPP05187 535 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 UMODP07911 640 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 COX4I1P13073 169 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 IDO1P14902 403 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 MAGP20916 626 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 GPX3P22352 226 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 CALB2P22676 271 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 COL8A1P27658 744 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PRDX6P30041 224 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 CMPK1P30085 196 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 RPS13P62277 151 aaKnown RBP12.87□□□□□ -0.35
LINC00173-201ENST00000470091 CSNK1G2P78368 415 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 ABATP80404 500 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 EMX2Q04743 252 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PRDX1Q06830 199 aaKnown RBP12.87□□□□□ -0.35
LINC00173-201ENST00000470091 MYBPC3Q14896 1274 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 KIR2DS3Q14952 304 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 HERC3Q15034 1050 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 GSTA3Q16772 222 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 SLC5A12Q1EHB4 618 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 AGKQ53H12 422 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 TLDC1Q6P9B6 456 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PAOXQ6QHF9 649 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 TTLL10Q6ZVT0 673 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PPP1R32Q7Z5V6 425 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 MIER2Q8N344 545 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 OR9I1Q8NGQ6 314 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PROKR1Q8TCW9 393 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 UBE2E3Q969T4 207 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 CMTM7Q96FZ5 175 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 PRAP1Q96NZ9 151 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 TUBB6Q9BUF5 446 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 ZNF552Q9H707 407 aaPredicted RBP12.87□□□□□ -0.35
LINC00173-201ENST00000470091 SLC22A11Q9NSA0 550 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 GPR45Q9Y5Y3 372 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 FER1L5A0AVI2 2057 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 LRBAP50851 2863 aa12.87□□□□□ -0.35
LINC00173-201ENST00000470091 FEZF1A0PJY2 475 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 C9JVG2 144 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 ALOX12BO75342 701 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 SEC22BO75396 215 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 ATP5HO75947 161 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 ETHE1O95571 254 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 CD63P08962 238 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 HSD3B1P14060 373 aa12.86□□□□□ -0.35
LINC00173-201ENST00000470091 PRPH2P23942 346 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms