RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 HLCSP50747 726 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 RAD23AP54725 363 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CLDN2P57739 230 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SHHQ15465 462 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 INAVAQ3KP66 663 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SPDYE7PQ495Y7 208 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 BROXQ5VW32 411 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SIGIRRQ6IA17 410 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 PRR23BQ6ZRT6 265 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 KIAA0907Q7Z7F0 614 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 SPARTQ8N0X7 666 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 PIK3C3Q8NEB9 887 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ABHD11Q8NFV4 315 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SUN5Q8TC36 379 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 OTUB2Q96DC9 234 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF486Q96H40 463 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 FAM83CQ9BQN1 747 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 MKRN2Q9H000 416 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 RAD21L1Q9H4I0 556 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 IL1RAPQ9NPH3 570 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SNX5Q9Y5X3 404 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 STON1Q9Y6Q2 735 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 A0A1W2PRB8 838 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 A0A1W2PS29 197 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CENPBD1B2RD01 187 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 H0Y8X5 98 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SLC1A7O00341 560 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 LCMT2O60294 686 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 FGF19O95750 216 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TGM1P22735 817 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 DRD3P35462 400 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 NR4A2P43354 598 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TAS2R38P59533 333 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ISL1P61371 349 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 CDK3Q00526 305 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 SPIBQ01892 262 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 TFF2Q03403 129 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 MTAPQ13126 283 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 RUNX3Q13761 415 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 DPY19L1Q2PZI1 675 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 WDR53Q7Z5U6 358 aaPredicted RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 C17orf64Q86WR6 236 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ANKRD53Q8N9V6 530 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ZNF540Q8NDQ6 660 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ZFP90Q8TF47 636 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 VMP1Q96GC9 406 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 PPP1R16AQ96I34 528 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 VPS35Q96QK1 796 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 FEVQ99581 238 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 REEP4Q9H6H4 257 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 FAM120CQ9NX05 1096 aaKnown RBP9□□□□□ -0.97
TOP3A-203ENST00000469739 QPCTLQ9NXS2 382 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 ASIC5Q9NY37 505 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 PSME2Q9UL46 239 aa9□□□□□ -0.97
TOP3A-203ENST00000469739 DOCK8Q8NF50 2099 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3DA0A087WVF3 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3IA0A087WXS9 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3EA0A087X179 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3KA0A087X1G2 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3FA6NER0 549 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3LB9A6J9 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 HOXC11O43248 304 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 GCM2O75603 506 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 PAPLNO95428 1278 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SLC35G4P0C7Q5 338 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3HP0C7X1 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 GPX2P18283 190 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 CD72P21854 359 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 MAPK12P53778 367 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 RAB8AP61006 207 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 MVKQ03426 396 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 CDK5R2Q13319 367 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 PDGFRLQ15198 375 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SYT16Q17RD7 645 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SPATS1Q496A3 300 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 ATAD3BQ5T9A4 648 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3GQ6DHY5 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3CQ6IPX1 549 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 PNCKQ6P2M8 343 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 VN1R5Q7Z5H4 357 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 AKAP14Q86UN6 197 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TBC1D3Q8IZP1 549 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 OR8J2Q8NGG1 315 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 RAD51AP1Q96B01 352 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 CNDP2Q96KP4 475 aaKnown RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 CSF3RQ99062 836 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TUBA1CQ9BQE3 449 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SLAMF7Q9NQ25 335 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 TEX10Q9NXF1 929 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 C1QTNF3-AMACRE9PGA6 284 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 QSOX1O00391 747 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 PLPP1O14494 284 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 HOXB9P17482 250 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 MANFP55145 182 aaKnown RBP8.99□□□□□ -0.97
TOP3A-203ENST00000469739 SCARB2Q14108 478 aa8.99□□□□□ -0.97
TOP3A-203ENST00000469739 FGL2Q14314 439 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms