RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SLC13A3Q8WWT9 602 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 ZNF560Q96MR9 790 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 ERGIC2Q96RQ1 377 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 NTMT1Q9BV86 223 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 DDX47Q9H0S4 455 aaKnown RBP4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 GPN1Q9HCN4 374 aaPredicted RBP4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 KCNMB3Q9NPA1 279 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 PIGVQ9NUD9 493 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 MRPS18CQ9Y3D5 142 aaKnown RBP4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
GAPVD1-211ENST00000467707 RPGRIP1LQ68CZ1 1315 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 RNF103-CHMP3A0A140T963 221 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 SEC22BO75396 215 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 NXPH4O95158 308 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 ZFP36L2P47974 494 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 SLC12A3P55017 1021 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 BACE1P56817 501 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 CDKL1Q00532 357 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 GALK2Q01415 458 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 WASHC5Q12768 1159 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 KIAA0141Q14154 515 aaPredicted RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 HEPACAMQ14CZ8 416 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 KRT31Q15323 416 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 MPPE1Q53F39 396 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 RAB12Q6IQ22 244 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 CAPN13Q6MZZ7 669 aaPredicted RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 NEK5Q6P3R8 708 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 CNSTQ6PJW8 725 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 DLEU7Q6UYE1 221 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 BHLHA9Q7RTU4 235 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 CCDC197Q8NCU1 140 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 SPPL2AQ8TCT8 520 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 URGCPQ8TCY9 931 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 U2AF1L4Q8WU68 220 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 DTD2Q96FN9 168 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 POM121L2Q96KW2 1035 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 AGAP4Q96P64 663 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 AGPAT1Q99943 283 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 PKP2Q99959 881 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 DCLRE1BQ9H816 532 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 NMUR1Q9HB89 426 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 HOMER3Q9NSC5 361 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 STRAPQ9Y3F4 350 aaKnown RBP4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 OR1A2Q9Y585 309 aa4.27□□□□□ -1.73
GAPVD1-211ENST00000467707 ABCC9O60706 1549 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 MYH14Q7Z406 1995 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 IGHV3-20A0A0C4DH32 117 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 TLR4O00206 839 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 EEF2KO00418 725 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 ARPC1BO15143 372 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 DCXO43602 365 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 NME2P1O60361 137 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 GMNNO75496 209 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 CXCL14O95715 111 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 APRTP07741 180 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 LYNP07948 512 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 UGT1A4P22310 534 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 AHCYP23526 432 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 CNN1P51911 297 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 BTG1P62324 171 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 MSLNQ13421 630 aaPredicted RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 GAMTQ14353 236 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 FAM189A2Q15884 450 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 UPP1Q16831 310 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 FASTKD1Q53R41 847 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 DDI2Q5TDH0 399 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 ZC2HC1BQ5TFG8 222 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 NKAIN2Q5VXU1 208 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 ZNF619Q8N2I2 560 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 HDDC3Q8N4P3 179 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 GVQW1Q8N7I0 195 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 LEMD2Q8NC56 503 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 KIAA1524Q8TCG1 905 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 TCP11Q8WWU5 503 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 C11orf52Q96A22 123 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 CNRIP1Q96F85 164 aaPredicted RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 UPF3AQ9H1J1 476 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 KCNK13Q9HB14 408 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 VPS54Q9P1Q0 977 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 KCNN3Q9UGI6 736 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 MRTO4Q9UKD2 239 aaKnown RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 RPH3AQ9Y2J0 694 aaPredicted RBP4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 RNF215Q9Y6U7 377 aa4.26□□□□□ -1.73
GAPVD1-211ENST00000467707 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 SRRM4A7MD48 611 aaKnown RBP4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 KIAA0513O60268 411 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 ZSCAN5DPP0CG00 497 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 TPBGLP0DKB5 382 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 CCDC192P0DO97 292 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 AOC1P19801 751 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 GLRA1P23415 457 aa4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 MARCKSP29966 332 aaPredicted RBP4.25□□□□□ -1.73
GAPVD1-211ENST00000467707 NUMBP49757 651 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms