RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ACPPP15309 386 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 IL10P22301 178 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 ETV4P43268 484 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 TSFMP43897 325 aaKnown RBP16.68■□□□□ 0.26
COL7A1-205ENST00000465238 XCR1P46094 333 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 KRT6CP48668 564 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 RAP1GDS1P52306 607 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 MAGOHP61326 146 aaKnown RBP16.68■□□□□ 0.26
COL7A1-205ENST00000465238 KLC1Q07866 573 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 AP5B1Q2VPB7 878 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 AGBL2Q5U5Z8 902 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 ABHD17CQ6PCB6 329 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 NUDCD3Q8IVD9 361 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 RNF175Q8N4F7 328 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 GOLGA6L1Q8N7Z2 621 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 OR5T3Q8NGG3 340 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 DNAJB14Q8TBM8 379 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 METTL6Q8TCB7 284 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 RGMAQ96B86 450 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 THOC3Q96J01 351 aaKnown RBP16.68■□□□□ 0.26
COL7A1-205ENST00000465238 CNDP1Q96KN2 507 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 KCNC2Q96PR1 638 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 TBCDQ9BTW9 1192 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 MECRQ9BV79 373 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 TGIF2Q9GZN2 237 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 ZNF225Q9UK10 706 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 CSAG2Q9Y5P2 127 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 SVILO95425 2214 aa16.68■□□□□ 0.26
COL7A1-205ENST00000465238 CELSR2Q9HCU4 2923 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 C4orf51C9J302 202 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 B3GALT2O43825 422 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 CRCPO75575 148 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 HPP00738 406 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 SERPINB4P48594 390 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 MTTPP55157 894 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 OLR1P78380 273 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 MFSD4BQ5TF39 518 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 B3GNTL1Q67FW5 361 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-205ENST00000465238 ISLR2Q6UXK2 745 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 MAMDC2Q7Z304 686 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-205ENST00000465238 ZC3H7AQ8IWR0 971 aaKnown RBP16.67■□□□□ 0.26
COL7A1-205ENST00000465238 ST6GALNAC3Q8NDV1 305 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 PPP1R14CQ8TAE6 165 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 SELENOMQ8WWX9 145 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 TLCD1Q96CP7 247 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 PEX11GQ96HA9 241 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 PKNOX2Q96KN3 472 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 SERINC2Q96SA4 455 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 SERPINI1Q99574 410 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 TRMOQ9BU70 441 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 NPLQ9BXD5 320 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-205ENST00000465238 PRDM7Q9NQW5 492 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 C3orf18Q9UK00 162 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 PPT2Q9UMR5 302 aa16.67■□□□□ 0.26
COL7A1-205ENST00000465238 DIDO1Q9BTC0 2240 aaKnown RBP16.66■□□□□ 0.26
COL7A1-205ENST00000465238 MYO9AB2RTY4 2548 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 SAP18O00422 153 aaKnown RBP16.66■□□□□ 0.26
COL7A1-205ENST00000465238 MANBAO00462 879 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 UBFD1O14562 309 aaKnown RBP16.66■□□□□ 0.26
COL7A1-205ENST00000465238 NPHS1O60500 1241 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 ULK1O75385 1050 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 BMP10O95393 424 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 HEXBP07686 556 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 UQCRHP07919 91 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 EMP2P54851 167 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 Q0VFX4 171 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 CUL3Q13618 768 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 ZNF169Q14929 603 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-205ENST00000465238 TLR1Q15399 786 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 HHATQ5VTY9 493 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 UBE3DQ7Z6J8 389 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 LAPTM4BQ86VI4 370 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 ARL8AQ96BM9 186 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 QRFPRQ96P65 431 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 LMF1Q96S06 567 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 NMRK1Q9NWW6 199 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 MKL2Q9ULH7 1088 aa16.66■□□□□ 0.26
COL7A1-205ENST00000465238 TMEM120BA0PK00 339 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 WDR91A4D1P6 747 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 IDSB3KWA1 339 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 PSMD12O00232 456 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-205ENST00000465238 BIRC5O15392 142 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 DNAJB6O75190 326 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 PDYNP01213 254 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 NEFHP12036 1026 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 RNH1P13489 461 aaKnown RBP16.65■□□□□ 0.26
COL7A1-205ENST00000465238 SSR2P43308 183 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 ARFIP1P53367 373 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 MFAP5Q13361 173 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 RUNX2Q13950 521 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 MPP2Q14168 576 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 MINDY4Q4G0A6 757 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 OR4C11Q6IEV9 310 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 ZGRF1Q86YA3 2104 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 KBTBD2Q8IY47 623 aa16.65■□□□□ 0.26
COL7A1-205ENST00000465238 CA13Q8N1Q1 262 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms