RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 RAB43Q86YS6 212 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ZNF781Q8N8C0 355 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 ZCCHC10Q8TBK6 192 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 AGR3Q8TD06 166 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 FKBP10Q96AY3 582 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 F2RL3Q96RI0 385 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 KCNA7Q96RP8 456 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 SORT1Q99523 831 aa16.47■□□□□ 0.23
CPSF4-209ENST00000465132 IFT80Q9P2H3 777 aaPredicted RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 MRPS33Q9Y291 106 aaKnown RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 RP1L1Q8IWN7 2480 aaPredicted RBP16.47■□□□□ 0.23
CPSF4-209ENST00000465132 SPTBP11277 2137 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 PSMD12O00232 456 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 GALR3O60755 368 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 KLF7O75840 302 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 KLHL18O94889 574 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 ONECUT2O95948 504 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 PRPH2P23942 346 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 HNRNPH1P31943 449 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 PLA2G16P53816 162 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 FOXA1P55317 472 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 BTN3A2P78410 334 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 OCA2Q04671 838 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 HYAL2Q12891 473 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 MRPL49Q13405 166 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 RAPSNQ13702 412 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 SLC9A5Q14940 896 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 SMU1Q2TAY7 513 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 EIF2S3LQ2VIR3 472 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 NKAIN1Q4KMZ8 207 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 DEFB134Q4QY38 66 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 ATP6AP1LQ52LC2 224 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 CYP20A1Q6UW02 462 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 FAM9CQ8IZT9 166 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 C19orf60Q96EN9 201 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 C10orf90Q96M02 699 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 GBP5Q96PP8 586 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 OR51B5Q9H339 312 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 MKKSQ9NPJ1 570 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 C14orf105Q9NVL8 296 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 LYARQ9NX58 379 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 DHCR7Q9UBM7 475 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 WBP11Q9Y2W2 641 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 NAALAD2Q9Y3Q0 740 aa16.46■□□□□ 0.23
CPSF4-209ENST00000465132 UTP20O75691 2785 aaKnown RBP16.46■□□□□ 0.23
CPSF4-209ENST00000465132 PCSK5Q92824 1860 aa16.46■□□□□ 0.22
CPSF4-209ENST00000465132 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 SMIM10L1P0DMW3 83 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 TROVE2P10155 538 aaKnown RBP eCLIP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 DDX5P17844 614 aaKnown RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 HIST1H1TP22492 207 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 JAK1P23458 1154 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 SERPINB3P29508 390 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 TLX1P31314 330 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 OTX2P32243 289 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 RAB8AP61006 207 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 TRA2BP62995 288 aaKnown RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 SSPNQ14714 243 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 NR6A1Q15406 480 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 UGT3A2Q3SY77 523 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 VWA5B1Q5TIE3 1220 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 MRGPREQ86SM8 312 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 METTL4Q8N3J2 472 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 ZCCHC7Q8N3Z6 543 aaKnown RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 SMIM10Q96HG1 83 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 VPS50Q96JG6 964 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 MACROD1Q9BQ69 325 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 DDX31Q9H8H2 851 aaKnown RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 WDR41Q9HAD4 459 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 LYRM4Q9HD34 91 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 FARSBQ9NSD9 589 aaKnown RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 C1orf109Q9NX04 203 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 SIRT5Q9NXA8 310 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 C5AR2Q9P296 337 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 MAP10Q9P2G4 905 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 ZNF282Q9UDV7 671 aaPredicted RBP16.45■□□□□ 0.22
CPSF4-209ENST00000465132 PHF11Q9UIL8 331 aa16.45■□□□□ 0.22
CPSF4-209ENST00000465132 PCDH17O14917 1159 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 PIP5K1BO14986 540 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 SEC22BO75396 215 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 SCELO95171 688 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 CYC1P08574 325 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
CPSF4-209ENST00000465132 LINC00032P0C843 101 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 RNH1P13489 461 aaKnown RBP16.44■□□□□ 0.22
CPSF4-209ENST00000465132 IL1RNP18510 177 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 ARRB2P32121 409 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 GUCY1A3Q02108 690 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 C1orf189Q5VU69 101 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 MLIPQ5VWP3 458 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 ARHGEF39Q8N4T4 335 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 OR9A4Q8NGU2 314 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 TUBGCP3Q96CW5 907 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 OR1F2PQ96R84 312 aa16.44■□□□□ 0.22
CPSF4-209ENST00000465132 YIPF2Q9BWQ6 316 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms