RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 A0A088AWK7 358 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 A0A1W2PR48 441 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 A6NL46 340 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 CYR61O00622 381 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 SEC24DO94855 1032 aaPredicted RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 AIFM1O95831 613 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 FAM58BPP0C7Q3 252 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 C8orf89P0DMQ9 161 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 ZNF10P21506 573 aaPredicted RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 MMP11P24347 488 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 UCNP55089 124 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 RAB38P57729 211 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 SKP1P63208 163 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 CSTF3Q12996 717 aaKnown RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 SLC13A2Q13183 592 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 SSPNQ14714 243 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 NR6A1Q15406 480 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 NSDHLQ15738 373 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 CCNYL2Q5T2Q4 361 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 Q6ZSR9 355 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 CLYBLQ8N0X4 340 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 SRFBP1Q8NEF9 429 aaKnown RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 MAGEB10Q96LZ2 347 aaPredicted RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 NUF2Q9BZD4 464 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 TGIF2Q9GZN2 237 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 DDX31Q9H8H2 851 aaKnown RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 INTS9Q9NV88 658 aaKnown RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 FBXL4Q9UKA2 621 aa11.17□□□□□ -0.62
APTX-213ENST00000465003 NXT1Q9UKK6 140 aaKnown RBP11.17□□□□□ -0.62
APTX-213ENST00000465003 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 GNG14A0A1W2PPG7 69 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 TMEM114B3SHH9 223 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 FGF17O60258 216 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 PRMT3O60678 531 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 PEX11AO75192 247 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 SCELO95171 688 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 FAM87AP0C7U9 286 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 MAPK12P53778 367 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 SLC18A1P54219 525 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 RPL38P63173 70 aaKnown RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 MC1RQ01726 317 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ACSM2AQ08AH3 577 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ZNF750Q32MQ0 723 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 VWA5B1Q5TIE3 1220 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ACSM2BQ68CK6 577 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 GPR155Q7Z3F1 870 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 GPR180Q86V85 440 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 OR11G2Q8NGC1 345 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 CLHC1Q8NHS4 586 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 CHTF18Q8WVB6 975 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ZNF75CPQ92670 426 aaPredicted RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 RASSF4Q9H2L5 321 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ZNF160Q9HCG1 818 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 DLGAP4Q9Y2H0 992 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ASB4Q9Y574 426 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 CLDN16Q9Y5I7 305 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 TNRC6AQ8NDV7 1962 aaKnown RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 PGRMC2O15173 223 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 PCDH7O60245 1069 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 SNNO75324 88 aaPredicted RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 SEC22BO75396 215 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 SEMA3DO95025 777 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 GRK2P25098 689 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ALDH9A1P49189 494 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 NAA20P61599 178 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.62
APTX-213ENST00000465003 RFTN2Q52LD8 501 aaPredicted RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 FAM47EQ6ZV65 393 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 THOC1Q96FV9 657 aaKnown RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 ILKAPQ9H0C8 392 aaPredicted RBP11.16□□□□□ -0.62
APTX-213ENST00000465003 ING2Q9H160 280 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 PRTFDC1Q9NRG1 225 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 POLHQ9Y253 713 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 RAP2CQ9Y3L5 183 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 KCNMB2Q9Y691 235 aa11.16□□□□□ -0.62
APTX-213ENST00000465003 LSM1O15116 133 aaKnown RBP11.15□□□□□ -0.62
APTX-213ENST00000465003 PROM1O43490 865 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 CHEK2O96017 543 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 FGF4P08620 206 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 COX6A1P12074 109 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 ACPPP15309 386 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 JAK1P23458 1154 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 TACR1P25103 407 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 SERPINB5P36952 375 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 RPL14P50914 215 aaKnown RBP11.15□□□□□ -0.62
APTX-213ENST00000465003 CCL11P51671 97 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 TAS2R50P59544 299 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 OCRLQ01968 901 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 TNFRSF17Q02223 184 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 Q0VFX4 171 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 TBR1Q16650 682 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 SFT2D3Q587I9 215 aa11.15□□□□□ -0.62
APTX-213ENST00000465003 HSP90B2PQ58FF3 399 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms