RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 RNF175Q8N4F7 328 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 MNS1Q8NEH6 495 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 IFT81Q8WYA0 676 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 TMEM125Q96AQ2 219 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 GPR78Q96P69 363 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 CCDC77Q9BR77 488 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 OR51B5Q9H339 312 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 CPSF2Q9P2I0 782 aaKnown RBP24.11■■□□□ 1.45
U2AF1-206ENST00000464750 SH3BGRL2Q9UJC5 107 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 SPACA6W5XKT8 324 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 NOTCH2Q04721 2471 aa24.11■■□□□ 1.45
U2AF1-206ENST00000464750 MYOCOSA0A1B0GUC4 107 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 LRRC14BA6NHZ5 514 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 NPIPA5E9PKD4 350 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 KLK8O60259 260 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 ITGA10O75578 1167 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 INHBAP08476 426 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 CA7P43166 264 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 STX4Q12846 297 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.1■■□□□ 1.45
U2AF1-206ENST00000464750 TECRLQ5HYJ1 363 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 TMEM132CQ8N3T6 1108 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 HUS1BQ8NHY5 278 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 SLC44A1Q8WWI5 657 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 TSPYL1Q9H0U9 437 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 ACTR8Q9H981 624 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 SUCOQ9UBS9 1254 aaKnown RBP24.1■■□□□ 1.45
U2AF1-206ENST00000464750 ADGRE2Q9UHX3 823 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 NPIPA1Q9UND3 350 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 CLCA3PQ9Y6N3 262 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 CACNA1DQ01668 2161 aa24.1■■□□□ 1.45
U2AF1-206ENST00000464750 PRKNO60260 465 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-206ENST00000464750 SLC19A2O60779 497 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 LDB3O75112 727 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 CTAGE8P0CG41 777 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 ECHS1P30084 290 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 PCBP2Q15366 365 aaKnown RBP eCLIP24.09■■□□□ 1.45
U2AF1-206ENST00000464750 DEPDC1Q5TB30 811 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 LIPJQ5W064 366 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 GOLGA7Q7Z5G4 137 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 CTAGE4Q8IX94 777 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 CYP4Z2PQ8N1L4 340 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 PLD6Q8N2A8 252 aaKnown RBP24.09■■□□□ 1.45
U2AF1-206ENST00000464750 TMEM156Q8N614 296 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 MAGED4Q96JG8 741 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 PAFAH2Q99487 392 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 SORBS1Q9BX66 1292 aaKnown RBP24.09■■□□□ 1.45
U2AF1-206ENST00000464750 ALOXE3Q9BYJ1 711 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 DMRT3Q9NQL9 472 aa24.09■■□□□ 1.45
U2AF1-206ENST00000464750 CENPEQ02224 2701 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 CCL21O00585 134 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 ZFAND5O76080 213 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 ZNF24P17028 368 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 CPN2P22792 545 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 RAP1GDS1P52306 607 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 GTF2H2Q13888 395 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 SERTAD2Q14140 314 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 KRTCAP3Q53RY4 240 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 GTF2H2CQ6P1K8 395 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 TAOK1Q7L7X3 1001 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 SIAH3Q8IW03 269 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 CPSF7Q8N684 471 aaKnown RBP24.08■■□□□ 1.45
U2AF1-206ENST00000464750 OR14A16Q8NHC5 309 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 DAZLQ92904 295 aaKnown RBP24.08■■□□□ 1.45
U2AF1-206ENST00000464750 ISL2Q96A47 359 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 MTERF1Q99551 399 aaKnown RBP24.08■■□□□ 1.45
U2AF1-206ENST00000464750 CENPKQ9BS16 269 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 VTI1BQ9UEU0 232 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 KLF13Q9Y2Y9 288 aaPredicted RBP24.08■■□□□ 1.45
U2AF1-206ENST00000464750 PCDHGA11Q9Y5H2 935 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 IKBKGQ9Y6K9 419 aa24.08■■□□□ 1.45
U2AF1-206ENST00000464750 GTF3C1Q12789 2109 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 SIX3O95343 332 aaPredicted RBP24.07■■□□□ 1.44
U2AF1-206ENST00000464750 PIK3CBP42338 1070 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 MAGEA12P43365 314 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 CASP6P55212 293 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 ID2Q02363 134 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 OR4C11Q6IEV9 310 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 PTPMT1Q8WUK0 201 aaPredicted RBP24.07■■□□□ 1.44
U2AF1-206ENST00000464750 RGMAQ96B86 450 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 CCDC120Q96HB5 630 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 ZNF358Q9NW07 568 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 TSC22D4Q9Y3Q8 395 aa24.07■■□□□ 1.44
U2AF1-206ENST00000464750 TNPO3Q9Y5L0 923 aaKnown RBP24.07■■□□□ 1.44
U2AF1-206ENST00000464750 PCNX1Q96RV3 2341 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 PLPP1O14494 284 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 UGDHO60701 494 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 TNNI3P19429 210 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 PIK3CGP48736 1102 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 MEOX1P50221 254 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 SERPINB9P50453 376 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 SSR4P51571 173 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 RPS13P62277 151 aaKnown RBP24.06■■□□□ 1.44
U2AF1-206ENST00000464750 PHEXP78562 749 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 C3AR1Q16581 482 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 GLE1Q53GS7 698 aaKnown RBP24.06■■□□□ 1.44
U2AF1-206ENST00000464750 C16orf47Q6ZP98 133 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-206ENST00000464750 PTGR2Q8N8N7 351 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-206ENST00000464750 MORN4Q8NDC4 146 aa24.06■■□□□ 1.44
U2AF1-206ENST00000464750 REPS1Q96D71 796 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms