RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 RGMBQ6NW40 437 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TRIM40Q6P9F5 258 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DPY19L3Q6ZPD9 716 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 USP50Q70EL3 339 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 C16orf59Q7L2K0 433 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RNF175Q8N4F7 328 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 HJURPQ8NCD3 748 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 OR8J1Q8NGP2 316 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SOSTQ9BQB4 213 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 POLR2J2Q9GZM3 115 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 ISYNA1Q9NPH2 558 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 C1GALT1Q9NS00 363 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RBFOX1Q9NWB1 397 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 ING3Q9NXR8 418 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 B3GNT2Q9NY97 397 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 REV1Q9UBZ9 1251 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DIMT1Q9UNQ2 313 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 MGAT4BQ9UQ53 548 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 PRG3Q9Y2Y8 225 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 PCDHGB7Q9Y5F8 929 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 OR51B4Q9Y5P0 310 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ALG5Q9Y673 324 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 FRMPD3Q5JV73 1810 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TEX51A0A1B0GUA7 166 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TRBC2A0A5B9 178 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 C2orf78A6NCI8 922 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 MGAT4DA6NG13 374 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 C12orf71A8MTZ7 269 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 UPK3BL1B0FP48 263 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 B8ZZF3 427 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 UPK3BL2E5RIL1 263 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CACNB4O00305 520 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 SLC43A1O75387 559 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 GJB5O95377 273 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SRCP12931 536 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 HLA-FP30511 346 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SDC2P34741 201 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RPL3P39023 403 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 PNLIPRP1P54315 467 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CLDN20P56880 219 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 BCL2L1Q07817 233 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RIN1Q13671 783 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CCL14Q16627 93 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 BTBD16Q32M84 506 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ESCO2Q56NI9 601 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 XKR6Q5GH73 641 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 FAM26DQ5JW98 314 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SLC25A30Q5SVS4 291 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 HECTD3Q5T447 861 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TRIQKQ629K1 86 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 ZNF852Q6ZMS4 543 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 IDO2Q6ZQW0 420 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TRIM48Q8IWZ4 208 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TAGAPQ8N103 731 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CAMKK1Q8N5S9 505 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DCAF4L2Q8NA75 395 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 NLGN4YQ8NFZ3 816 aaPredicted RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 AP2M1Q96CW1 435 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 CLIP3Q96DZ5 547 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 KCTD7Q96MP8 289 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SLC6A18Q96N87 628 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 NELL2Q99435 816 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 P2RY13Q9BPV8 354 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SLC35A5Q9BS91 424 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SYT17Q9BSW7 474 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TSSK6Q9BXA6 273 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 BEX2Q9BXY8 128 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 REEP4Q9H6H4 257 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 RC3H2Q9HBD1 1191 aaKnown RBP6.97□□□□□ -1.29
USP48-206ENST00000464577 C11orf16Q9NQ32 467 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 DNAJC27Q9NZQ0 273 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 KCNN3Q9UGI6 736 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 STOML2Q9UJZ1 356 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 TMCC3Q9ULS5 477 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 NOD1Q9Y239 953 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 SNX11Q9Y5W9 270 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 VWA8A3KMH1 1905 aa6.97□□□□□ -1.29
USP48-206ENST00000464577 A0A1W2PQ67 120 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 A0A1W2PQ72 361 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZNF840PA6NDX5 716 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 ZSCAN5BA6NJL1 495 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 FAAHO00519 579 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 PLD2O14939 933 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 KPNA5O15131 536 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 COCHO43405 550 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 NOS1APO75052 506 aaPredicted RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 OR2B3O76000 313 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 AP2A2O94973 939 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 RAB36O95755 333 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 LATS1O95835 1130 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 RECKO95980 971 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 CSF2P04141 144 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 CLEC2LP0C7M8 214 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 GAAP10253 952 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 PRKAR1AP10644 381 aa6.96□□□□□ -1.29
USP48-206ENST00000464577 DDX5P17844 614 aaKnown RBP6.96□□□□□ -1.29
USP48-206ENST00000464577 POU1F1P28069 291 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms