RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 SLC9A4Q6AI14 798 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 CLEC17AQ6ZS10 378 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 GRAMD2AQ8IUY3 354 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 NUP43Q8NFH3 380 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 OR9A1PQ8NGU1 263 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-211ENST00000463372 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 ZNF418Q8TF45 676 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-211ENST00000463372 TFB1MQ8WVM0 346 aaKnown RBP12.11□□□□□ -0.47
C9orf3-211ENST00000463372 TM4SF19Q96DZ7 209 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 UCN2Q96RP3 112 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 SYT11Q9BT88 431 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 TRAF4Q9BUZ4 470 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-211ENST00000463372 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
C9orf3-211ENST00000463372 ZNF839A8K0R7 811 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 GFYI3L273 518 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 MYO1FO00160 1098 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 ACTL6AO96019 429 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
C9orf3-211ENST00000463372 ZFXP17010 805 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-211ENST00000463372 KDELR1P24390 212 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 SRYQ05066 204 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 ARHGAP19Q14CB8 494 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 PEG10Q86TG7 708 aaKnown RBP12.1□□□□□ -0.47
C9orf3-211ENST00000463372 FAM13CQ8NE31 585 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 OR5L2Q8NGL0 311 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 LKAAEAR1Q8TD35 194 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 MRPL24Q96A35 216 aaKnown RBP12.1□□□□□ -0.47
C9orf3-211ENST00000463372 ALS2CR12Q96Q35 445 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 VAT1Q99536 393 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 RHBGQ9H310 441 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 PROK2Q9HC23 129 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 TMEM184CQ9NVA4 438 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 CLCA3PQ9Y6N3 262 aa12.1□□□□□ -0.47
C9orf3-211ENST00000463372 SMAPO00193 183 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 TPM2P07951 284 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 VSIG8P0DPA2 414 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 RNH1P13489 461 aaKnown RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 CPN1P15169 458 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 ALOX12P18054 663 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 HSD17B2P37059 387 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 PNLIPRP1P54315 467 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 RNF4P78317 190 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 GGTLC2Q14390 218 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 PGGHGQ32M88 737 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 ZNF791Q3KP31 576 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 CAPN13Q6MZZ7 669 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 BZW1Q7L1Q6 419 aaKnown RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 ADGRE4PQ86SQ3 457 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 KRT222Q8N1A0 295 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 FERMT1Q9BQL6 677 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 GRIP2Q9C0E4 1043 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 DNAJC11Q9NVH1 559 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 CLCF1Q9UBD9 225 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-211ENST00000463372 MMACHCQ9Y4U1 282 aa12.09□□□□□ -0.47
C9orf3-211ENST00000463372 CSF3P09919 207 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 HRH2P25021 359 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 PPP2R1BP30154 601 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 ADRA1AP35348 466 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 LIMS1P48059 325 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 NAGLUP54802 743 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 DYNLT1P63172 113 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 SCGB2A2Q13296 93 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF672Q499Z4 452 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 EIPR1Q53HC9 387 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 OR2A2Q6IF42 318 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 IRF2BP2Q7Z5L9 587 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 PPFIBP2Q8ND30 876 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF740Q8NDX6 193 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 OR8K3Q8NH51 312 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 NEUROG1Q92886 237 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 TP53INP1Q96A56 240 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 SPACA9Q96E40 222 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 MRFAP1L1Q96HT8 127 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 ZNF845Q96IR2 970 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 EIF2B3Q9NR50 452 aaKnown RBP12.08□□□□□ -0.48
C9orf3-211ENST00000463372 MED29Q9NX70 200 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 PLCE1Q9P212 2302 aa12.08□□□□□ -0.48
C9orf3-211ENST00000463372 OR51F1A6NGY5 319 aa12.07□□□□□ -0.48
C9orf3-211ENST00000463372 ABCB7O75027 752 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms