RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 WDR41Q9HAD4 459 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 C3orf14Q9HBI5 128 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 MID1IP1Q9NPA3 183 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 IL1RAPQ9NPH3 570 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 ZNF275Q9NSD4 429 aaPredicted RBP1.82□□□□□ -2.12
SYPL1-203ENST00000460770 THYN1Q9P016 225 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 SEPT10Q9P0V9 454 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 RNF150Q9ULK6 438 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 SPATA2Q9UM82 520 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 CPQQ9Y646 472 aa1.82□□□□□ -2.12
SYPL1-203ENST00000460770 A0A1W2PPK0 400 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 WI2-2373I1.2A0A1W2PRP0 233 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 LRRD1A4D1F6 860 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 HTR3EA5X5Y0 456 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 KRT87PA6NCN2 255 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 FAM86B1E9PN63 330 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 TRIM77I1YAP6 450 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PTGESO14684 152 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ZBTB14O43829 449 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 STAM2O75886 525 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 GBAP04062 536 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ZFYP08048 801 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 FAM86B2P0C5J1 330 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 OR52Z1P0C646 297 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 FAM58BPP0C7Q3 252 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 F3P13726 295 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 SELEP16581 610 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 EPORP19235 508 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 CASTP20810 708 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MAPK3P27361 379 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 HPDP32754 393 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 KIF5BP33176 963 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 FEN1P39748 380 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 CRKLP46109 303 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 NT5C2P49902 561 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 UCNP55089 124 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 CLDN17P56750 224 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 POLR2FP61218 127 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 HNRNPKP61978 463 aaKnown RBP eCLIP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 RBPJQ06330 500 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ACSM1Q08AH1 577 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 RPA4Q13156 261 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 CYLC2Q14093 348 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MORF4L2Q15014 288 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MEP1BQ16820 701 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ECSCRQ19T08 205 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 KNOP1Q1ED39 458 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 VWC2Q2TAL6 325 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 SLC22A6Q4U2R8 563 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PARP10Q53GL7 1025 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 SPANXN4Q5MJ08 99 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 LIPJQ5W064 366 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 REP15Q6BDI9 236 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ARMCX5Q6P1M9 558 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 TATDN1Q6P1N9 297 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MOXD1Q6UVY6 613 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 GBP6Q6ZN66 633 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 C11orf57Q6ZUT1 292 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 CPEB2Q7Z5Q1 589 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 AMIGO1Q86WK6 493 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 DZIP1Q86YF9 867 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PEX5LQ8IYB4 626 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PRSS35Q8N3Z0 413 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 NHLRC2Q8NBF2 726 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ROBO4Q8WZ75 1007 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 NABP1Q96AH0 204 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ZNF799Q96GE5 643 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 RMDN2Q96LZ7 410 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 AK8Q96MA6 479 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 RUNDC3BQ96NL0 473 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 NEDD4LQ96PU5 975 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 TMEM237Q96Q45 408 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PRAM1Q96QH2 718 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 ATP6V0BQ99437 205 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PI4K2AQ9BTU6 479 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MLPHQ9BV36 600 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 KATNB1Q9BVA0 655 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 TNMDQ9H2S6 317 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 IL1RAPL2Q9NP60 686 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 PDRG1Q9NUG6 133 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 IL17CQ9P0M4 197 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 SENP1Q9P0U3 644 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 RSPH14Q9UHP6 348 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 LIPT1Q9Y234 373 aa1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MTF2Q9Y483 593 aaPredicted RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 MYH14Q7Z406 1995 aaKnown RBP1.81□□□□□ -2.12
SYPL1-203ENST00000460770 SYCE3A1L190 88 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 SMIM30A4D0T7 59 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 CCDC69A6NI79 296 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 CCDC188H7C350 402 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 SLC33A1O00400 549 aaPredicted RBP1.8□□□□□ -2.12
SYPL1-203ENST00000460770 PGRMC2O15173 223 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 ST8SIA3O43173 380 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 SRPX2O60687 465 aaPredicted RBP1.8□□□□□ -2.12
SYPL1-203ENST00000460770 GSRP00390 522 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 PNPP00491 289 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 PIGRP01833 764 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 RLN1P04808 185 aa1.8□□□□□ -2.12
SYPL1-203ENST00000460770 VIMP08670 466 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms